RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 USP17L3A6NCW0 530 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 USP17L4A6NCW7 530 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 KIF5BP33176 963 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 TRAPPC10P48553 1259 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 USP17L1Q7RTZ2 530 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 CPLX3Q8WVH0 158 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 ARHGEF1Q92888 912 aaKnown RBP23.78■■□□□ 1.4
TMC6-212ENST00000589553 ZNF446Q9NWS9 450 aa23.78■■□□□ 1.4
TMC6-212ENST00000589553 SOWAHDA6NJG2 315 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 GNG11P61952 73 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 RBL2Q08999 1139 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 BLIDQ8IZY5 108 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 IGSF22Q8N9C0 903 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 SLC44A5Q8NCS7 719 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 C8orf37Q96NL8 207 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 ANKIB1Q9P2G1 1089 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 SBF2Q86WG5 1849 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 AKR1B15C9JRZ8 316 aaPredicted RBP23.77■■□□□ 1.4
TMC6-212ENST00000589553 DMTNQ08495 405 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 SLC35G1Q2M3R5 365 aa23.77■■□□□ 1.4
TMC6-212ENST00000589553 CT47A1Q5JQC4 288 aaPredicted RBP23.77■■□□□ 1.4
TMC6-212ENST00000589553 CCNL1Q9UK58 526 aaPredicted RBP23.77■■□□□ 1.4
TMC6-212ENST00000589553 LDHBP07195 334 aaKnown RBP23.76■■□□□ 1.39
TMC6-212ENST00000589553 PBX1P40424 430 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 NFIXQ14938 502 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 KARSQ15046 597 aaKnown RBP23.76■■□□□ 1.39
TMC6-212ENST00000589553 ARHGAP29Q52LW3 1261 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 CARD6Q9BX69 1037 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 PRDM4Q9UKN5 801 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
TMC6-212ENST00000589553 BTAF1O14981 1849 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 LTBP4Q8N2S1 1624 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 H2AFXP16104 143 aaPredicted RBP23.76■■□□□ 1.39
TMC6-212ENST00000589553 SPTY2D1Q68D10 685 aaPredicted RBP23.76■■□□□ 1.39
TMC6-212ENST00000589553 C4orf32Q8N8J7 132 aa23.76■■□□□ 1.39
TMC6-212ENST00000589553 MRPL44Q9H9J2 332 aaKnown RBP23.76■■□□□ 1.39
TMC6-212ENST00000589553 CCT6AP40227 531 aaKnown RBP23.75■■□□□ 1.39
TMC6-212ENST00000589553 RRAGBQ5VZM2 374 aa23.75■■□□□ 1.39
TMC6-212ENST00000589553 RASGRP2Q7LDG7 609 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 DGKHQ86XP1 1220 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 MKNK2Q9HBH9 465 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 MAD2L2Q9UI95 211 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 PCDHA4Q9UN74 947 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 CALML3P27482 149 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 RAD9BQ6WBX8 426 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 TGFBRAP1Q8WUH2 860 aa23.74■■□□□ 1.39
TMC6-212ENST00000589553 A0A0U1RQJ8 604 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 GTPBP6O43824 516 aaPredicted RBP23.73■■□□□ 1.39
TMC6-212ENST00000589553 IGSF3O75054 1194 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 MNS1Q8NEH6 495 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 ATRIPQ8WXE1 791 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 PANX2Q96RD6 677 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 SAP30BPQ9UHR5 308 aaKnown RBP23.73■■□□□ 1.39
TMC6-212ENST00000589553 GOLGA6L9A6NEM1 432 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 CYTH3O43739 400 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 GRM4Q14833 912 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 PPFIBP1Q86W92 1011 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 IRX2Q9BZI1 471 aaPredicted RBP23.73■■□□□ 1.39
TMC6-212ENST00000589553 MAPK8IP1Q9UQF2 711 aa23.73■■□□□ 1.39
TMC6-212ENST00000589553 PP2D1A8MPX8 630 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 TADA3O75528 432 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 CASQ1P31415 396 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 CLCN6P51797 869 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 VPS72Q15906 364 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 WWC2Q6AWC2 1192 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 GDAQ9Y2T3 454 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 TSPY3P0CV98 308 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 TSPY8P0CW00 308 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 CASP14P31944 242 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 KRT31Q15323 416 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 MAPKAPK5Q8IW41 473 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 WDR66Q8TBY9 1149 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 KIFC2Q96AC6 838 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 CTAGE1Q96RT6 745 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 TMEM60Q9H2L4 133 aa23.72■■□□□ 1.39
TMC6-212ENST00000589553 M0R2N6 131 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 MFAP3LO75121 409 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 ARL6IP4Q66PJ3 421 aaKnown RBP23.71■■□□□ 1.39
TMC6-212ENST00000589553 UBXN4Q92575 508 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 CPVLQ9H3G5 476 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 ROBO3Q96MS0 1386 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 GYPCP04921 128 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 GOLGA8HP0CJ92 632 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 LONP1P36776 959 aaKnown RBP23.71■■□□□ 1.39
TMC6-212ENST00000589553 FXR1P51114 621 aaKnown RBP eCLIP23.71■■□□□ 1.39
TMC6-212ENST00000589553 GRAPQ13588 217 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 FILIP1LQ4L180 1135 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 HEATR3Q7Z4Q2 680 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 GRAPLQ8TC17 118 aaPredicted RBP23.71■■□□□ 1.39
TMC6-212ENST00000589553 ANKS1AQ92625 1134 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 PCDHA6Q9UN73 950 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 STX8Q9UNK0 236 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 PCDHA8Q9Y5H6 950 aa23.71■■□□□ 1.39
TMC6-212ENST00000589553 RPN1P04843 607 aaKnown RBP23.7■■□□□ 1.38
TMC6-212ENST00000589553 STAT6P42226 847 aa23.7■■□□□ 1.38
TMC6-212ENST00000589553 PAK1Q13153 545 aa23.7■■□□□ 1.38
TMC6-212ENST00000589553 INF2Q27J81 1249 aa23.7■■□□□ 1.38
TMC6-212ENST00000589553 SRRTQ9BXP5 876 aaKnown RBP23.7■■□□□ 1.38
TMC6-212ENST00000589553 EPC1Q9H2F5 836 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms