RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LINC01599Q8WXQ3 324 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 BCL2L13Q9BXK5 485 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 GCM1Q9NP62 436 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 ST13P50502 369 aaKnown RBP5.83□□□□□ -1.48
SMAD4-207ENST00000589076 TMEM62Q0P6H9 643 aa5.83□□□□□ -1.48
SMAD4-207ENST00000589076 NMIQ13287 307 aaPredicted RBP5.83□□□□□ -1.48
SMAD4-207ENST00000589076 ZNF326Q5BKZ1 582 aaKnown RBP5.83□□□□□ -1.48
SMAD4-207ENST00000589076 CEP128Q6ZU80 1094 aa5.83□□□□□ -1.48
SMAD4-207ENST00000589076 SP8Q8IXZ3 490 aa5.83□□□□□ -1.48
SMAD4-207ENST00000589076 DUSP9Q99956 384 aaKnown RBP5.83□□□□□ -1.48
SMAD4-207ENST00000589076 TLR6Q9Y2C9 796 aa5.83□□□□□ -1.48
SMAD4-207ENST00000589076 N4BP3O15049 544 aa5.82□□□□□ -1.48
SMAD4-207ENST00000589076 TRIM13O60858 407 aa5.82□□□□□ -1.48
SMAD4-207ENST00000589076 CELA3BP08861 270 aa5.82□□□□□ -1.48
SMAD4-207ENST00000589076 ARL4AP40617 200 aa5.82□□□□□ -1.48
SMAD4-207ENST00000589076 RBM25P49756 843 aaKnown RBP5.82□□□□□ -1.48
SMAD4-207ENST00000589076 SSPNQ14714 243 aa5.82□□□□□ -1.48
SMAD4-207ENST00000589076 EAPPQ56P03 285 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-207ENST00000589076 NLRX1Q86UT6 975 aa5.82□□□□□ -1.48
SMAD4-207ENST00000589076 SYTL5Q8TDW5 730 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-207ENST00000589076 MBD1Q9UIS9 605 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-207ENST00000589076 NRDCO43847 1150 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 CILPO75339 1184 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 USP2O75604 605 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-207ENST00000589076 MPOP05164 745 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 ENDOUP21128 410 aaKnown RBP5.81□□□□□ -1.48
SMAD4-207ENST00000589076 ITGAEP38570 1179 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 GALK1P51570 392 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 PSMD2Q13200 908 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 CAMK2GQ13555 558 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-207ENST00000589076 PWP1Q13610 501 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 PRRT2Q7Z6L0 340 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-207ENST00000589076 RELL1Q8IUW5 271 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 ZNF655Q8N720 491 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-207ENST00000589076 DAGLBQ8NCG7 672 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 PHC3Q8NDX5 983 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 GATAD2BQ8WXI9 593 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 SHISA4Q96DD7 197 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 MAP6Q96JE9 813 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 REV1Q9UBZ9 1251 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 JAG2Q9Y219 1238 aa5.81□□□□□ -1.48
SMAD4-207ENST00000589076 SHISA3A0PJX4 238 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 E9PSI1 815 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 PNLIPP16233 465 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 ZNF16P17020 682 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-207ENST00000589076 RANGAP1P46060 587 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-207ENST00000589076 LMNB2Q03252 620 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 MEI1Q5TIA1 1274 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 CNKSR3Q6P9H4 555 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 BNC2Q6ZN30 1099 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-207ENST00000589076 FBXO33Q7Z6M2 555 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 GIPC2Q8TF65 315 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 DACT3Q96B18 629 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-207ENST00000589076 TCFL5Q9UL49 500 aa5.8□□□□□ -1.48
SMAD4-207ENST00000589076 PRR36Q9H6K5 1346 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 CHURC1-FNTBB4DL54 471 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 RBAK-RBAKDNI3L0D1 243 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 HTR3BO95264 441 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 VIPR1P32241 457 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 RTP1P59025 263 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 XPCQ01831 940 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-207ENST00000589076 GALNT18Q6P9A2 607 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 ZNF428Q96B54 188 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 KIF2CQ99661 725 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.485e-7■■□□□ 12.5
SMAD4-207ENST00000589076 BCL11AQ9H165 835 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 EBF1Q9UH73 591 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
SMAD4-207ENST00000589076 RAG1P15918 1043 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 RAD51AP2Q09MP3 1159 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 LAPTM5Q13571 262 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 SNAP47Q5SQN1 464 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 USHBP1Q8N6Y0 703 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 LINC00116Q8NCU8 138 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 MZB1Q8WU39 189 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 TCTN2Q96GX1 697 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 G6PC3Q9BUM1 346 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 XYLT2Q9H1B5 865 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 TNFRSF10DQ9UBN6 386 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 ZNF281Q9Y2X9 895 aa5.78□□□□□ -1.48
SMAD4-207ENST00000589076 FAM221AA4D161 298 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 OTOL1A6NHN0 477 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-207ENST00000589076 WTIPA6NIX2 430 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-207ENST00000589076 SLC22A31A6NKX4 558 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 RGS13O14921 159 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 GRIN3BO60391 1043 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 FKTNO75072 461 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 F13A1P00488 732 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 PF4P02776 101 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 SYPP08247 313 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 GBP2P32456 591 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-207ENST00000589076 EPHB3P54753 998 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 YBX1P67809 324 aaKnown RBP5.77□□□□□ -1.49
SMAD4-207ENST00000589076 PANK1Q8TE04 598 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 HDAC8Q9BY41 377 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 CNTD2Q9H8S5 307 aa5.77□□□□□ -1.49
SMAD4-207ENST00000589076 ZC3H12DA2A288 527 aaKnown RBP5.76□□□□□ -1.49
SMAD4-207ENST00000589076 MPP2Q14168 576 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms