RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SARSP49591 514 aaKnown RBP17.4■□□□□ 0.38
MBD1-217ENST00000588937 PTGDRQ13258 359 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 CCDC144BQ3MJ40 725 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
MBD1-217ENST00000588937 MSL1Q68DK7 614 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
MBD1-217ENST00000588937 SPZ1Q9BXG8 430 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 MAN1B1Q9UKM7 699 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 SLFN14P0C7P3 912 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
MBD1-217ENST00000588937 PDILTQ8N807 584 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
MBD1-217ENST00000588937 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
MBD1-217ENST00000588937 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
MBD1-217ENST00000588937 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
MBD1-217ENST00000588937 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
MBD1-217ENST00000588937 NOVP48745 357 aa17.39■□□□□ 0.37
MBD1-217ENST00000588937 C17orf53Q8N3J3 647 aaPredicted RBP17.39■□□□□ 0.37
MBD1-217ENST00000588937 SYMPKQ92797 1274 aaKnown RBP17.39■□□□□ 0.37
MBD1-217ENST00000588937 XPO4Q9C0E2 1151 aaKnown RBP17.39■□□□□ 0.37
MBD1-217ENST00000588937 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
MBD1-217ENST00000588937 IFNKQ9P0W0 207 aa17.39■□□□□ 0.37
MBD1-217ENST00000588937 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
MBD1-217ENST00000588937 KIF13BQ9NQT8 1826 aa17.39■□□□□ 0.37
MBD1-217ENST00000588937 KLRF2D3W0D1 207 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 FANCCQ00597 558 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 LRMPQ12912 555 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 MORC3Q14149 939 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 HHIPL2Q6UWX4 724 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 FILIP1Q7Z7B0 1213 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 DHX58Q96C10 678 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 SWAP70Q9UH65 585 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 FOXN1O15353 648 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
MBD1-217ENST00000588937 MCM7P33993 719 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 WWC2Q6AWC2 1192 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 USP49Q70CQ1 688 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 SPATA20Q8TB22 786 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.37
MBD1-217ENST00000588937 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 EPSTI1Q96J88 318 aa17.38■□□□□ 0.37
MBD1-217ENST00000588937 C10orf71Q711Q0 1435 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 M0R2N6 131 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 STXBP3O00186 592 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 CYTH3O43739 400 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 NRDCO43847 1150 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 VEGFAP15692 232 aaPredicted RBP17.37■□□□□ 0.37
MBD1-217ENST00000588937 LONP1P36776 959 aaKnown RBP17.37■□□□□ 0.37
MBD1-217ENST00000588937 TXLNAP40222 546 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
MBD1-217ENST00000588937 PODNQ7Z5L7 613 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 IQUBQ8NA54 791 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 CCDC150Q8NCX0 1101 aa17.37■□□□□ 0.37
MBD1-217ENST00000588937 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
MBD1-217ENST00000588937 PDGFDQ9GZP0 370 aaPredicted RBP17.37■□□□□ 0.37
MBD1-217ENST00000588937 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
MBD1-217ENST00000588937 F8W031 263 aaPredicted RBP17.36■□□□□ 0.37
MBD1-217ENST00000588937 WNT7AO00755 349 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 SERPINC1P01008 464 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 GNA11P29992 359 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 GABPAQ06546 454 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 PICALMQ13492 652 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 SH3RF1Q7Z6J0 888 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 CERS5Q8N5B7 392 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 ENOX1Q8TC92 643 aaKnown RBP17.36■□□□□ 0.37
MBD1-217ENST00000588937 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.376e-7■■■□□ 16.6
MBD1-217ENST00000588937 TEKT1Q969V4 418 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 USP40Q9NVE5 1235 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 MYH8P13535 1937 aa17.36■□□□□ 0.37
MBD1-217ENST00000588937 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
MBD1-217ENST00000588937 H0YIN7 160 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 hCG_1984214I3L0E3 225 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 LAD1O00515 517 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 BMP6P22004 513 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 UBASH3AP57075 661 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 FKBP1AP62942 108 aaKnown RBP17.35■□□□□ 0.37
MBD1-217ENST00000588937 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 ZNF713Q8N859 430 aaPredicted RBP17.35■□□□□ 0.37
MBD1-217ENST00000588937 PAGE5Q96GU1 130 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 GSDMAQ96QA5 445 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 HLA-DOAP06340 250 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 ERCC5P28715 1186 aaPredicted RBP17.35■□□□□ 0.37
MBD1-217ENST00000588937 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 MRIQ9BWK5 157 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 HSD3B7Q9H2F3 369 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
MBD1-217ENST00000588937 UQCRHLA0A096LP55 91 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms