RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 ZNF543Q08ER8 600 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 NUP88Q99567 741 aaPredicted RBP16.84■□□□□ 0.29
NPC1-207ENST00000588867 UBA5Q9GZZ9 404 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 CHMP5Q9NZZ3 219 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 KIF3AQ9Y496 699 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 SNCAIPQ9Y6H5 919 aa16.84■□□□□ 0.29
NPC1-207ENST00000588867 V9GY48 417 aaPredicted RBP16.84■□□□□ 0.29
NPC1-207ENST00000588867 BAZ2BQ9UIF8 2168 aaKnown RBP16.83■□□□□ 0.28
NPC1-207ENST00000588867 hCG_1642624A0A1W2PR95 340 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 TRIM75PA6NK02 468 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 USP17L10C9JJH3 530 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 CELF2O95319 508 aaKnown RBP16.83■□□□□ 0.28
NPC1-207ENST00000588867 ZNF280CQ8ND82 737 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 CLMNQ96JQ2 1002 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 VCPKMTQ9H867 229 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
NPC1-207ENST00000588867 SYT1P21579 422 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 FUT2Q10981 343 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 MTMR2Q13614 643 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 GPATCH4Q5T3I0 446 aaKnown RBP16.82■□□□□ 0.28
NPC1-207ENST00000588867 TTBK2Q6IQ55 1244 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 WDR18Q9BV38 432 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
NPC1-207ENST00000588867 BMP3P12645 472 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 PDCP20941 246 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 PKP1Q13835 747 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 GMCL1Q96IK5 515 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 RNF26Q9BY78 433 aaPredicted RBP16.82■□□□□ 0.28
NPC1-207ENST00000588867 KIAA1683Q9H0B3 1180 aa16.82■□□□□ 0.28
NPC1-207ENST00000588867 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
NPC1-207ENST00000588867 CNTNAP5Q8WYK1 1306 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 OTOFQ9HC10 1997 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 PRPF3O43395 683 aaKnown RBP16.81■□□□□ 0.28
NPC1-207ENST00000588867 SLC16A2P36021 539 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 IKQ13123 557 aaPredicted RBP16.81■□□□□ 0.28
NPC1-207ENST00000588867 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
NPC1-207ENST00000588867 C2orf69Q8N8R5 385 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
NPC1-207ENST00000588867 AIFM3Q96NN9 605 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 ALG1Q9BT22 464 aa16.81■□□□□ 0.28
NPC1-207ENST00000588867 GBA2Q9HCG7 927 aaPredicted RBP16.81■□□□□ 0.28
NPC1-207ENST00000588867 VPS37CA5D8V6 355 aaPredicted RBP16.8■□□□□ 0.28
NPC1-207ENST00000588867 TMEM232C9JQI7 657 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 CYTH3O43739 400 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 DEXIO95424 95 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 BACE1P56817 501 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 DGKZQ13574 1117 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 FAM83BQ5T0W9 1011 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 WASF1Q92558 559 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 H3BQV1 296 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 KIF3CO14782 793 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 STX6O43752 255 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 USP14P54578 494 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 NUCB2P80303 420 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 SLC35G1Q2M3R5 365 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 AFG3L2Q9Y4W6 797 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 MYH6P13533 1939 aa16.8■□□□□ 0.28
NPC1-207ENST00000588867 LDLRAD1Q5T700 205 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 ERO1BQ86YB8 467 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 SLC10A4Q96EP9 437 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 C8orf76Q96K31 380 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 SMARCA1P28370 1054 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 HMGCS2P54868 508 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 FKBP1BP68106 108 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 GUCY1B3Q02153 619 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
NPC1-207ENST00000588867 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
NPC1-207ENST00000588867 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 PHIPQ8WWQ0 1821 aa16.79■□□□□ 0.28
NPC1-207ENST00000588867 C19orf81C9J6K1 198 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 PPATQ06203 517 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 PKN1Q16512 942 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 CST9Q5W186 159 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 OTUD7BQ6GQQ9 843 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 LPAR1Q92633 364 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 PIGSQ96S52 555 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
NPC1-207ENST00000588867 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
NPC1-207ENST00000588867 YY1P25490 414 aa16.77■□□□□ 0.28
NPC1-207ENST00000588867 STAT2P52630 851 aa16.77■□□□□ 0.28
NPC1-207ENST00000588867 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
NPC1-207ENST00000588867 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.28
NPC1-207ENST00000588867 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
NPC1-207ENST00000588867 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.28
NPC1-207ENST00000588867 SPDYE5A6NIY4 337 aa16.77■□□□□ 0.27
NPC1-207ENST00000588867 IRF6O14896 467 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms