RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 PGK2P07205 417 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 CYP2D6P10635 497 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 FPGSQ05932 587 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 TMEM132BQ14DG7 1078 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 AACSQ86V21 672 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 DYNLL2Q96FJ2 89 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 MMP19Q99542 508 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 TINF2Q9BSI4 451 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 VCPKMTQ9H867 229 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 DCP1AQ9NPI6 582 aaPredicted RBP18.5■□□□□ 0.55
IFT20-216ENST00000588477 TMEM39AQ9NV64 488 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 TMX2Q9Y320 296 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.49■□□□□ 0.55
IFT20-216ENST00000588477 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.49■□□□□ 0.55
IFT20-216ENST00000588477 PDE6AP16499 860 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 TAL1P17542 331 aaPredicted RBP18.49■□□□□ 0.55
IFT20-216ENST00000588477 DNAJB2P25686 324 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 ICA1Q05084 483 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
IFT20-216ENST00000588477 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 NRBP1Q9UHY1 535 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 ZNF532Q9HCE3 1301 aa18.49■□□□□ 0.55
IFT20-216ENST00000588477 WDR46O15213 610 aaKnown RBP18.48■□□□□ 0.55
IFT20-216ENST00000588477 AKR1B1P15121 316 aa18.48■□□□□ 0.55
IFT20-216ENST00000588477 FAAP100Q0VG06 881 aa18.48■□□□□ 0.55
IFT20-216ENST00000588477 LCORLQ8N3X6 602 aa18.48■□□□□ 0.55
IFT20-216ENST00000588477 LENG1Q96BZ8 264 aaPredicted RBP18.48■□□□□ 0.55
IFT20-216ENST00000588477 SH2D4AQ9H788 454 aa18.48■□□□□ 0.55
IFT20-216ENST00000588477 ZNF865P0CJ78 1059 aaPredicted RBP18.47■□□□□ 0.55
IFT20-216ENST00000588477 AKR1A1P14550 325 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 KCTD2Q14681 263 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 ZNF792Q3KQV3 632 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 TJAP1Q5JTD0 557 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 RIOX2Q8IUF8 465 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 ZNF576Q9H609 170 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 FBXO28Q9NVF7 368 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 ADAMTS5Q9UNA0 930 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 DIS3Q9Y2L1 958 aaKnown RBP18.47■□□□□ 0.55
IFT20-216ENST00000588477 MUC3AQ02505 3323 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 MYH4Q9Y623 1939 aa18.47■□□□□ 0.55
IFT20-216ENST00000588477 DCDC2CA8MYV0 355 aa18.46■□□□□ 0.55
IFT20-216ENST00000588477 STAT3P40763 770 aa18.46■□□□□ 0.55
IFT20-216ENST00000588477 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
IFT20-216ENST00000588477 ARMT1Q9H993 441 aa18.46■□□□□ 0.55
IFT20-216ENST00000588477 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
IFT20-216ENST00000588477 STARD7Q9NQZ5 370 aa18.46■□□□□ 0.55
IFT20-216ENST00000588477 TCRBV5S4A2TA0A5A2 114 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 ACLYP53396 1101 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 ANKRD33Q7Z3H0 272 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 ERC1Q8IUD2 1116 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 NUP133Q8WUM0 1156 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 PPM1EQ8WY54 764 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 TOX2Q96NM4 488 aa18.45■□□□□ 0.54
IFT20-216ENST00000588477 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
IFT20-216ENST00000588477 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.45■□□□□ 0.54
IFT20-216ENST00000588477 TSEN34Q9BSV6 310 aaKnown RBP18.45■□□□□ 0.54
IFT20-216ENST00000588477 ROBO3Q96MS0 1386 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 GOLIM4O00461 696 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 VWA5AO00534 786 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 PRKAB2O43741 272 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 TIMP1P01033 207 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 EEF2P13639 858 aaKnown RBP18.44■□□□□ 0.54
IFT20-216ENST00000588477 COL9A1P20849 921 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 CDK8P49336 464 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 TIFAQ96CG3 184 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 CCDC17Q96LX7 622 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 CNPY2Q9Y2B0 182 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 SYNRGQ9UMZ2 1314 aa18.44■□□□□ 0.54
IFT20-216ENST00000588477 TCF20Q9UGU0 1960 aaKnown RBP18.43■□□□□ 0.54
IFT20-216ENST00000588477 CYP2D7A0A087X1C5 515 aa18.43■□□□□ 0.54
IFT20-216ENST00000588477 RAD21O60216 631 aa18.43■□□□□ 0.54
IFT20-216ENST00000588477 RLBP1P12271 317 aa18.43■□□□□ 0.54
IFT20-216ENST00000588477 KCNA10Q16322 511 aa18.43■□□□□ 0.54
IFT20-216ENST00000588477 ZNF214Q9UL59 606 aaPredicted RBP18.43■□□□□ 0.54
IFT20-216ENST00000588477 PPP1R9AQ9ULJ8 1098 aa18.43■□□□□ 0.54
IFT20-216ENST00000588477 TTC28Q96AY4 2481 aa18.43■□□□□ 0.54
IFT20-216ENST00000588477 GREB1LQ9C091 1923 aaPredicted RBP18.43■□□□□ 0.54
IFT20-216ENST00000588477 MOXD2PA6NHM9 499 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 SLFNL1Q499Z3 407 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 MFSD5Q6N075 450 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 CCDC129Q6ZRS4 1044 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 KLHDC9Q8NEP7 349 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 GAS2L1Q99501 681 aaPredicted RBP18.42■□□□□ 0.54
IFT20-216ENST00000588477 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 GOPCQ9HD26 462 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 ATP8A2Q9NTI2 1148 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 FAM184BQ9ULE4 1060 aa18.42■□□□□ 0.54
IFT20-216ENST00000588477 GRXCR1A8MXD5 290 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 MBD4O95243 580 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 SNAI1O95863 264 aaPredicted RBP18.41■□□□□ 0.54
IFT20-216ENST00000588477 COPB2P35606 906 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 PBX2P40425 430 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms