RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 TSHZ3Q63HK5 1081 aa18.84■□□□□ 0.61
NCLN-203ENST00000587740 CERS3Q8IU89 383 aa18.84■□□□□ 0.61
NCLN-203ENST00000587740 RIOK1Q9BRS2 568 aaKnown RBP18.84■□□□□ 0.61
NCLN-203ENST00000587740 A0A0G2JMZ2 1700 aa18.83■□□□□ 0.61
NCLN-203ENST00000587740 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.61
NCLN-203ENST00000587740 ZNFX1Q9P2E3 1918 aaKnown RBP18.83■□□□□ 0.6
NCLN-203ENST00000587740 MYCNP04198 464 aaPredicted RBP18.83■□□□□ 0.6
NCLN-203ENST00000587740 ITGB8P26012 769 aa18.83■□□□□ 0.6
NCLN-203ENST00000587740 SMAD3P84022 425 aaKnown RBP18.83■□□□□ 0.6
NCLN-203ENST00000587740 LRRC41Q15345 812 aa18.83■□□□□ 0.6
NCLN-203ENST00000587740 FAM47AQ5JRC9 791 aa18.83■□□□□ 0.6
NCLN-203ENST00000587740 SHCBP1Q8NEM2 672 aa18.83■□□□□ 0.6
NCLN-203ENST00000587740 FERMT2Q96AC1 680 aa18.83■□□□□ 0.6
NCLN-203ENST00000587740 HOXC10Q9NYD6 342 aa18.83■□□□□ 0.6
NCLN-203ENST00000587740 PDE1AP54750 535 aa18.82■□□□□ 0.6
NCLN-203ENST00000587740 EPHB4P54760 987 aa18.82■□□□□ 0.6
NCLN-203ENST00000587740 C1orf53Q5VUE5 145 aa18.82■□□□□ 0.6
NCLN-203ENST00000587740 ERICH6BQ5W0A0 696 aa18.82■□□□□ 0.6
NCLN-203ENST00000587740 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
NCLN-203ENST00000587740 DSG3P32926 999 aa18.81■□□□□ 0.6
NCLN-203ENST00000587740 TLE2Q04725 743 aa18.81■□□□□ 0.6
NCLN-203ENST00000587740 PI4K2BQ8TCG2 481 aa18.81■□□□□ 0.6
NCLN-203ENST00000587740 MAML3Q96JK9 1138 aa18.81■□□□□ 0.6
NCLN-203ENST00000587740 TANGO6Q9C0B7 1094 aa18.81■□□□□ 0.6
NCLN-203ENST00000587740 POLR3DP05423 398 aaPredicted RBP18.8■□□□□ 0.6
NCLN-203ENST00000587740 TMED8Q6PL24 325 aaPredicted RBP18.8■□□□□ 0.6
NCLN-203ENST00000587740 CENPQQ7L2Z9 268 aaPredicted RBP18.8■□□□□ 0.6
NCLN-203ENST00000587740 SIAH1Q8IUQ4 282 aa18.8■□□□□ 0.6
NCLN-203ENST00000587740 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.62e-6■■■■□ 23.9
NCLN-203ENST00000587740 MUC3AQ02505 3323 aa18.8■□□□□ 0.6
NCLN-203ENST00000587740 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
NCLN-203ENST00000587740 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
NCLN-203ENST00000587740 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
NCLN-203ENST00000587740 ABRAQ8N0Z2 381 aa18.79■□□□□ 0.6
NCLN-203ENST00000587740 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
NCLN-203ENST00000587740 ATG4CQ96DT6 458 aa18.79■□□□□ 0.6
NCLN-203ENST00000587740 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
NCLN-203ENST00000587740 PHF24Q9UPV7 400 aa18.79■□□□□ 0.6
NCLN-203ENST00000587740 MAGEB6P1A0A0J9YX57 407 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 CYP2D6P10635 497 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 FOSL2P15408 326 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 PLS1Q14651 629 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 NCAPG2Q86XI2 1143 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 CLEC10AQ8IUN9 316 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 PLEKHM2Q8IWE5 1019 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 MB21D1Q8N884 522 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 MROH8Q9H579 483 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 SLC5A4Q9NY91 659 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 PARP14Q460N5 1801 aa18.78■□□□□ 0.6
NCLN-203ENST00000587740 PDE6AP16499 860 aa18.77■□□□□ 0.6
NCLN-203ENST00000587740 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
NCLN-203ENST00000587740 SPICE1Q8N0Z3 855 aa18.77■□□□□ 0.6
NCLN-203ENST00000587740 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.6
NCLN-203ENST00000587740 MYO9BQ13459 2157 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 FLOT1O75955 427 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 PGK1P00558 417 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 CLTBP09497 229 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 TAL1P17542 331 aaPredicted RBP18.76■□□□□ 0.59
NCLN-203ENST00000587740 TMEM132BQ14DG7 1078 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 KBTBD3Q8NAB2 608 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 SDR42E1Q8WUS8 393 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 DYNLL2Q96FJ2 89 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 RNPC3Q96LT9 517 aaKnown RBP18.76■□□□□ 0.59
NCLN-203ENST00000587740 OSBPL3Q9H4L5 887 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 DCP1AQ9NPI6 582 aaPredicted RBP18.76■□□□□ 0.59
NCLN-203ENST00000587740 XPNPEP3Q9NQH7 507 aa18.76■□□□□ 0.59
NCLN-203ENST00000587740 COL11A1P12107 1806 aaPredicted RBP18.76■□□□□ 0.59
NCLN-203ENST00000587740 ZNF532Q9HCE3 1301 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 SMIM22K7EJ46 135 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 KIAA0355O15063 1070 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 FCER1AP12319 257 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 AKR1B1P15121 316 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 GRIN2CQ14957 1233 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 LRRFIP1Q32MZ4 808 aaKnown RBP18.75■□□□□ 0.59
NCLN-203ENST00000587740 TMEM179Q6ZVK1 233 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 CRNKL1Q9BZJ0 848 aaKnown RBP18.75■□□□□ 0.59
NCLN-203ENST00000587740 PPP4R2Q9NY27 417 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 TMX2Q9Y320 296 aa18.75■□□□□ 0.59
NCLN-203ENST00000587740 TMEM265A0A087WTH1 108 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 TCRBV5S4A2TA0A5A2 114 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 PGK2P07205 417 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 RARBP10826 455 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 PDE4AP27815 886 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 ADD2P35612 726 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
NCLN-203ENST00000587740 LCORLQ8N3X6 602 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
NCLN-203ENST00000587740 VCPKMTQ9H867 229 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 ADAMTS5Q9UNA0 930 aa18.74■□□□□ 0.59
NCLN-203ENST00000587740 PLXNA1Q9UIW2 1896 aa18.73■□□□□ 0.59
NCLN-203ENST00000587740 A0A1W2PQ45 241 aaPredicted RBP18.73■□□□□ 0.59
NCLN-203ENST00000587740 A0A1W2PQY0 241 aa18.73■□□□□ 0.59
NCLN-203ENST00000587740 PQBP1O60828 265 aaKnown RBP18.73■□□□□ 0.59
NCLN-203ENST00000587740 ZNF865P0CJ78 1059 aaPredicted RBP18.73■□□□□ 0.59
NCLN-203ENST00000587740 ZNF792Q3KQV3 632 aa18.73■□□□□ 0.59
NCLN-203ENST00000587740 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
NCLN-203ENST00000587740 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms