RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 LPAR1Q92633 364 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 LBHD1Q9BQE6 289 aaPredicted RBP7.73□□□□□ -1.17
SDF2-205ENST00000587629 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.73□□□□□ -1.17
SDF2-205ENST00000587629 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 FBXO28Q9NVF7 368 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 SWAP70Q9UH65 585 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 DDX19BQ9UMR2 479 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 ATP11BQ9Y2G3 1177 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 SLC4A4Q9Y6R1 1079 aa7.73□□□□□ -1.17
SDF2-205ENST00000587629 DNAH12Q6ZR08 3092 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 COL6A3P12111 3177 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 DNM1LO00429 736 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 STRNO43815 780 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 MSCO60682 206 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 PGK2P07205 417 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 CYBAP13498 195 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 EEF2P13639 858 aaKnown RBP7.72□□□□□ -1.17
SDF2-205ENST00000587629 ATP5JP18859 108 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 ADCYAP1R1P41586 468 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 SLC4A3P48751 1232 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 RTP1P59025 263 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 LRIT3Q3SXY7 679 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 C20orf194Q5TEA3 1177 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 C12orf60Q5U649 245 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 CTR9Q6PD62 1173 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 AMOTL1Q8IY63 956 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 FERMT2Q96AC1 680 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 FAM161BQ96MY7 647 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 HAUS7Q99871 368 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 PUS7LQ9H0K6 701 aaKnown RBP7.72□□□□□ -1.17
SDF2-205ENST00000587629 MROH8Q9H579 483 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 VCPKMTQ9H867 229 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 PRDM5Q9NQX1 630 aaPredicted RBP7.72□□□□□ -1.17
SDF2-205ENST00000587629 ATP8A2Q9NTI2 1148 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 PRKAG2Q9UGJ0 569 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 TMX2Q9Y320 296 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 NAV1Q8NEY1 1877 aa7.72□□□□□ -1.17
SDF2-205ENST00000587629 KBTBD13C9JR72 458 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 SEC24BO95487 1268 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 IGHA2P01877 340 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 FCER1AP12319 257 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 TMEM132BQ14DG7 1078 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 FAM83BQ5T0W9 1011 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 TSHZ3Q63HK5 1081 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 OLFML2BQ68BL8 750 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 C16orf86Q6ZW13 317 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 MB21D1Q8N884 522 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 ARRDC4Q8NCT1 418 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 SHCBP1Q8NEM2 672 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 MAML3Q96JK9 1138 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 MMP19Q99542 508 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 NUP88Q99567 741 aaPredicted RBP7.71□□□□□ -1.18
SDF2-205ENST00000587629 LRRCC1Q9C099 1032 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 SH2D4AQ9H788 454 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 BMP2KQ9NSY1 1161 aaPredicted RBP7.71□□□□□ -1.18
SDF2-205ENST00000587629 MTMR10Q9NXD2 777 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 SLC5A4Q9NY91 659 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 RCAN3Q9UKA8 241 aa7.71□□□□□ -1.18
SDF2-205ENST00000587629 MINDY4BA8MYZ0 360 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 WDR46O15213 610 aaKnown RBP7.7□□□□□ -1.18
SDF2-205ENST00000587629 SEPT4O43236 478 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 TAL1P17542 331 aaPredicted RBP7.7□□□□□ -1.18
SDF2-205ENST00000587629 MMRN1Q13201 1228 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 LRRC41Q15345 812 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 UBE3CQ15386 1083 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 TRIM60Q495X7 471 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 FAM47AQ5JRC9 791 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 ZSCAN25Q6NSZ9 544 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 GPR153Q6NV75 609 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 SLC39A5Q6ZMH5 540 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 CHMP4CQ96CF2 233 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 CCDC17Q96LX7 622 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 KANSL2Q9H9L4 492 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 MKNK2Q9HBH9 465 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 GOPCQ9HD26 462 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 TRPC6Q9Y210 931 aa7.7□□□□□ -1.18
SDF2-205ENST00000587629 A0A0C4DFX4 3053 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 GSG1L2A8MUP6 293 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 VWA5AO00534 786 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 PRDM1O75626 825 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 SLC25A27O95847 323 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 PGK1P00558 417 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 APPP05067 770 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 STAT3P40763 770 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 KCTD2Q14681 263 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 SHHQ15465 462 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 C9orf50Q5SZB4 431 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 SH3RF1Q7Z6J0 888 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 RIOX2Q8IUF8 465 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 ABRAQ8N0Z2 381 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 BADQ92934 168 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 LENG1Q96BZ8 264 aaPredicted RBP7.69□□□□□ -1.18
SDF2-205ENST00000587629 STRBPQ96SI9 672 aaKnown RBP7.69□□□□□ -1.18
SDF2-205ENST00000587629 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.69□□□□□ -1.18
SDF2-205ENST00000587629 CHMP4BQ9H444 224 aaKnown RBP7.69□□□□□ -1.18
SDF2-205ENST00000587629 XPNPEP3Q9NQH7 507 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 CLIP2Q9UDT6 1046 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 STXBP5LQ9Y2K9 1186 aa7.69□□□□□ -1.18
SDF2-205ENST00000587629 BAZ2AQ9UIF9 1905 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms