RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ZSCAN25Q6NSZ9 544 aa18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 SHCBP1Q8NEM2 672 aa18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 SH2D4AQ9H788 454 aa18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 EPB41L4AQ9HCS5 686 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-204ENST00000587290 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 MINDY4BA8MYZ0 360 aa18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 M0R2C6 588 aa18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 KBTBD3Q8NAB2 608 aa18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 UBE2OQ9C0C9 1292 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 DCTPP1Q9H773 170 aa18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 ARPP21Q9UBL0 812 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-204ENST00000587290 MCM3APO60318 1980 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 PGK2P07205 417 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 RASA1P20936 1047 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 OLFML2BQ68BL8 750 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 Q7L0L9 218 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 MAML3Q96JK9 1138 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 MROH8Q9H579 483 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
PRKCSH-204ENST00000587290 DNM1LO00429 736 aa18.21■□□□□ 0.51
PRKCSH-204ENST00000587290 GPAA1O43292 621 aa18.21■□□□□ 0.51
PRKCSH-204ENST00000587290 STRNO43815 780 aa18.21■□□□□ 0.51
PRKCSH-204ENST00000587290 PRDM1O75626 825 aa18.21■□□□□ 0.51
PRKCSH-204ENST00000587290 TDHQ8IZJ6 230 aa18.21■□□□□ 0.51
PRKCSH-204ENST00000587290 APPBP2Q92624 585 aa18.21■□□□□ 0.51
PRKCSH-204ENST00000587290 ROBO3Q96MS0 1386 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 MSCO60682 206 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 FCER1AP12319 257 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 RTP1P59025 263 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 REPS2Q8NFH8 660 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 SEC62Q99442 399 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 MMP19Q99542 508 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 PPP1R9AQ9ULJ8 1098 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
PRKCSH-204ENST00000587290 VWA5AO00534 786 aa18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 LENG1Q96BZ8 264 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 ADAMTS5Q9UNA0 930 aa18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 ATP11BQ9Y2G3 1177 aa18.19■□□□□ 0.5
PRKCSH-204ENST00000587290 SEPT4O43236 478 aa18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 NDUFB10O96000 172 aa18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 TAL1P17542 331 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 TDO2P48775 406 aa18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 RIOX2Q8IUF8 465 aa18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 ABRAQ8N0Z2 381 aa18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 FERMT2Q96AC1 680 aa18.18■□□□□ 0.5
PRKCSH-204ENST00000587290 SLC25A27O95847 323 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 APPP05067 770 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 STAT3P40763 770 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
PRKCSH-204ENST00000587290 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 F5H6K3 240 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 ADCYAP1R1P41586 468 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 KLRC3Q07444 240 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 LRRC41Q15345 812 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 LRIT3Q3SXY7 679 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 TRIM60Q495X7 471 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 DEFB123Q8N688 67 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 CEP95Q96GE4 821 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 SLF1Q9BQI6 1058 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 CLIP2Q9UDT6 1046 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 RIPK3Q9Y572 518 aa18.16■□□□□ 0.5
PRKCSH-204ENST00000587290 IGKV6D-41A0A0C4DH26 115 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 KCTD2Q14681 263 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 ZNF792Q3KQV3 632 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 SNRNP48Q6IEG0 339 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 GIMAP6Q6P9H5 292 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 SLC39A5Q6ZMH5 540 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 ARRDC4Q8NCT1 418 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 PRDM5Q9NQX1 630 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 NYAP2Q9P242 653 aa18.15■□□□□ 0.5
PRKCSH-204ENST00000587290 PGK1P00558 417 aa18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 KIFC2Q96AC6 838 aa18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 TINF2Q9BSI4 451 aa18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 FSD1Q9BTV5 496 aa18.14■□□□□ 0.49
PRKCSH-204ENST00000587290 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-204ENST00000587290 SH3RF1Q7Z6J0 888 aa18.13■□□□□ 0.49
PRKCSH-204ENST00000587290 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
PRKCSH-204ENST00000587290 RAVER2Q9HCJ3 691 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-204ENST00000587290 XPNPEP3Q9NQH7 507 aa18.13■□□□□ 0.49
PRKCSH-204ENST00000587290 CDH23Q9H251 3354 aa18.13■□□□□ 0.49
PRKCSH-204ENST00000587290 ZNF865P0CJ78 1059 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 GNAT2P19087 354 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms