RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 BAZ2AQ9UIF9 1905 aaKnown RBP19.72■□□□□ 0.75
NPC1-205ENST00000587163 MYH8P13535 1937 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 ADD2P35612 726 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 CDK8P49336 464 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 ZNF697Q5TEC3 545 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 C12orf60Q5U649 245 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 ATP8A2Q9NTI2 1148 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 FBXO28Q9NVF7 368 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 PAG1Q9NWQ8 432 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 SMCHD1A6NHR9 2005 aa19.71■□□□□ 0.75
NPC1-205ENST00000587163 COL11A1P12107 1806 aaPredicted RBP19.7■□□□□ 0.74
NPC1-205ENST00000587163 USP17L12C9JPN9 530 aa19.7■□□□□ 0.74
NPC1-205ENST00000587163 USP17L21D6R901 530 aa19.7■□□□□ 0.74
NPC1-205ENST00000587163 WDR46O15213 610 aaKnown RBP19.7■□□□□ 0.74
NPC1-205ENST00000587163 PGK2P07205 417 aa19.7■□□□□ 0.74
NPC1-205ENST00000587163 EEF2P13639 858 aaKnown RBP19.7■□□□□ 0.74
NPC1-205ENST00000587163 C1orf53Q5VUE5 145 aa19.7■□□□□ 0.74
NPC1-205ENST00000587163 CDX2Q99626 313 aaPredicted RBP19.7■□□□□ 0.74
NPC1-205ENST00000587163 SEMA6BQ9H3T3 888 aa19.7■□□□□ 0.74
NPC1-205ENST00000587163 SH2D4AQ9H788 454 aa19.7■□□□□ 0.74
NPC1-205ENST00000587163 SLC25A27O95847 323 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 TAL1P17542 331 aaPredicted RBP19.69■□□□□ 0.74
NPC1-205ENST00000587163 ITGB8P26012 769 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 TLE2Q04725 743 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 CCDC17Q96LX7 622 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 MMP19Q99542 508 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 XPNPEP3Q9NQH7 507 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 EYSQ5T1H1 3165 aa19.69■□□□□ 0.74
NPC1-205ENST00000587163 PGK1P00558 417 aa19.68■□□□□ 0.74
NPC1-205ENST00000587163 C16orf86Q6ZW13 317 aa19.68■□□□□ 0.74
NPC1-205ENST00000587163 RPAP2Q8IXW5 612 aaPredicted RBP19.68■□□□□ 0.74
NPC1-205ENST00000587163 PHF24Q9UPV7 400 aa19.68■□□□□ 0.74
NPC1-205ENST00000587163 VWA5AO00534 786 aa19.67■□□□□ 0.74
NPC1-205ENST00000587163 ATP5JP18859 108 aa19.67■□□□□ 0.74
NPC1-205ENST00000587163 ZNF792Q3KQV3 632 aa19.67■□□□□ 0.74
NPC1-205ENST00000587163 RIOX2Q8IUF8 465 aa19.67■□□□□ 0.74
NPC1-205ENST00000587163 TINF2Q9BSI4 451 aa19.67■□□□□ 0.74
NPC1-205ENST00000587163 TTYH1Q9H313 450 aaPredicted RBP19.67■□□□□ 0.74
NPC1-205ENST00000587163 NRBP1Q9UHY1 535 aa19.67■□□□□ 0.74
NPC1-205ENST00000587163 ZNF865P0CJ78 1059 aaPredicted RBP19.66■□□□□ 0.74
NPC1-205ENST00000587163 RARBP10826 455 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 STAT3P40763 770 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 EPHB4P54760 987 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 REPS2Q8NFH8 660 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 HAUS7Q99871 368 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.66■□□□□ 0.74
NPC1-205ENST00000587163 KANSL2Q9H9L4 492 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 ZBTB40Q9NUA8 1239 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 ZNF214Q9UL59 606 aaPredicted RBP19.66■□□□□ 0.74
NPC1-205ENST00000587163 PPP1R9AQ9ULJ8 1098 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 SLC4A4Q9Y6R1 1079 aa19.66■□□□□ 0.74
NPC1-205ENST00000587163 PLXNA1Q9UIW2 1896 aa19.65■□□□□ 0.74
NPC1-205ENST00000587163 RAB11FIP3O75154 756 aa19.65■□□□□ 0.74
NPC1-205ENST00000587163 SMAD3P84022 425 aaKnown RBP19.65■□□□□ 0.74
NPC1-205ENST00000587163 FAM83BQ5T0W9 1011 aa19.65■□□□□ 0.74
NPC1-205ENST00000587163 LENG1Q96BZ8 264 aaPredicted RBP19.65■□□□□ 0.74
NPC1-205ENST00000587163 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
NPC1-205ENST00000587163 DIS3Q9Y2L1 958 aaKnown RBP19.65■□□□□ 0.74
NPC1-205ENST00000587163 COG6Q9Y2V7 657 aa19.65■□□□□ 0.74
NPC1-205ENST00000587163 TACC3Q9Y6A5 838 aa19.65■□□□□ 0.74
NPC1-205ENST00000587163 RAD21O60216 631 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 HMMRO75330 724 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 KCTD2Q14681 263 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 UBE3CQ15386 1083 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 RNF180Q86T96 592 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 MAFAQ8NHW3 353 aaPredicted RBP19.64■□□□□ 0.73
NPC1-205ENST00000587163 MYLIPQ8WY64 445 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 PUS7LQ9H0K6 701 aaKnown RBP19.64■□□□□ 0.73
NPC1-205ENST00000587163 ZBED9Q6R2W3 1325 aa19.64■□□□□ 0.73
NPC1-205ENST00000587163 VCANP13611 3396 aa19.63■□□□□ 0.73
NPC1-205ENST00000587163 CDH23Q9H251 3354 aa19.63■□□□□ 0.73
NPC1-205ENST00000587163 A0A1W2PQ45 241 aaPredicted RBP19.63■□□□□ 0.73
NPC1-205ENST00000587163 A0A1W2PQY0 241 aa19.63■□□□□ 0.73
NPC1-205ENST00000587163 CLTBP09497 229 aa19.63■□□□□ 0.73
NPC1-205ENST00000587163 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
NPC1-205ENST00000587163 NUP88Q99567 741 aaPredicted RBP19.63■□□□□ 0.73
NPC1-205ENST00000587163 GOPCQ9HD26 462 aa19.63■□□□□ 0.73
NPC1-205ENST00000587163 KIAA0355O15063 1070 aa19.62■□□□□ 0.73
NPC1-205ENST00000587163 PQBP1O60828 265 aaKnown RBP19.62■□□□□ 0.73
NPC1-205ENST00000587163 ADAMTS4O75173 837 aa19.62■□□□□ 0.73
NPC1-205ENST00000587163 MIER1Q8N108 512 aa19.62■□□□□ 0.73
NPC1-205ENST00000587163 ROBO3Q96MS0 1386 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 AKR1A1P14550 325 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 STK11IPQ8N1F8 1099 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 DDRGK1Q96HY6 314 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 RIPK3Q9Y572 518 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 PRUNE2Q8WUY3 3088 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 MYH7P12883 1935 aa19.61■□□□□ 0.73
NPC1-205ENST00000587163 SNAI1O95863 264 aaPredicted RBP19.6■□□□□ 0.73
NPC1-205ENST00000587163 MS4A1P11836 297 aa19.6■□□□□ 0.73
NPC1-205ENST00000587163 RAG1P15918 1043 aa19.6■□□□□ 0.73
NPC1-205ENST00000587163 ACLYP53396 1101 aa19.6■□□□□ 0.73
NPC1-205ENST00000587163 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
NPC1-205ENST00000587163 RNPC3Q96LT9 517 aaKnown RBP19.6■□□□□ 0.73
NPC1-205ENST00000587163 STRBPQ96SI9 672 aaKnown RBP19.6■□□□□ 0.73
NPC1-205ENST00000587163 TMEM39AQ9NV64 488 aa19.6■□□□□ 0.73
NPC1-205ENST00000587163 DDX19BQ9UMR2 479 aa19.6■□□□□ 0.73
NPC1-205ENST00000587163 CNPY2Q9Y2B0 182 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms