RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 RBM28Q9NW13 759 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 STX8Q9UNK0 236 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 MTMR7Q9Y216 660 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 ATP6V1DQ9Y5K8 247 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 BAZ2BQ9UIF8 2168 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 CCDC196A0A1B0GTZ2 297 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 FKTNO75072 461 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 NPM3O75607 178 aaKnown RBP11.8□□□□□ -0.52
APOC1-201ENST00000586638 FUT2Q10981 343 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 PRKG1Q13976 671 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 GRM4Q14833 912 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
APOC1-201ENST00000586638 KRT40Q6A162 431 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 FBXO46Q6PJ61 603 aaPredicted RBP11.8□□□□□ -0.52
APOC1-201ENST00000586638 TRIM22Q8IYM9 498 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 TMEM87AQ8NBN3 555 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
APOC1-201ENST00000586638 ANKS1AQ92625 1134 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
APOC1-201ENST00000586638 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
APOC1-201ENST00000586638 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
APOC1-201ENST00000586638 DHX36Q9H2U1 1008 aaKnown RBP11.8□□□□□ -0.52
APOC1-201ENST00000586638 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
APOC1-201ENST00000586638 MPHOSPH10O00566 681 aaKnown RBP11.79□□□□□ -0.52
APOC1-201ENST00000586638 KRT85P78386 507 aa11.79□□□□□ -0.52
APOC1-201ENST00000586638 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
APOC1-201ENST00000586638 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
APOC1-201ENST00000586638 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
APOC1-201ENST00000586638 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
APOC1-201ENST00000586638 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
APOC1-201ENST00000586638 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
APOC1-201ENST00000586638 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
APOC1-201ENST00000586638 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
APOC1-201ENST00000586638 GDF11O95390 407 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 DEXIO95424 95 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
APOC1-201ENST00000586638 INHBEP58166 350 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 APOBEC3FQ8IUX4 373 aaKnown RBP11.78□□□□□ -0.52
APOC1-201ENST00000586638 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 SRBD1Q8N5C6 995 aaKnown RBP11.78□□□□□ -0.52
APOC1-201ENST00000586638 GPT2Q8TD30 523 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 WASF1Q92558 559 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 SLC10A4Q96EP9 437 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
APOC1-201ENST00000586638 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOC1-201ENST00000586638 R3HDMLQ9H3Y0 253 aa11.78□□□□□ -0.52
APOC1-201ENST00000586638 ZSCAN16Q9H4T2 348 aaPredicted RBP11.78□□□□□ -0.52
APOC1-201ENST00000586638 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 KIF5BP33176 963 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 NOVP48745 357 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
APOC1-201ENST00000586638 TRIM29Q14134 588 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 PPP2R5BQ15173 497 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 PKN1Q16512 942 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
APOC1-201ENST00000586638 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 SHISA4Q96DD7 197 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
APOC1-201ENST00000586638 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.53
APOC1-201ENST00000586638 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
APOC1-201ENST00000586638 PI4KBQ9UBF8 816 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 MAD2L2Q9UI95 211 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
APOC1-201ENST00000586638 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
APOC1-201ENST00000586638 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
APOC1-201ENST00000586638 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 CSPP1Q1MSJ5 1256 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 PAPPA2Q9BXP8 1791 aa11.76□□□□□ -0.53
APOC1-201ENST00000586638 DOCK1Q14185 1865 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 MYO1BO43795 1136 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 TTLL1O95922 423 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 MBD3O95983 291 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 MMP1P03956 469 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 RRP1BQ14684 758 aaKnown RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 BRAPQ7Z569 592 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 LEO1Q8WVC0 666 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms