RNA–Protein interactions for RNA: ENST00000586574.5

GIT1-215, Transcript of GIT ArfGAP 1, human

TSL 4

Gene GIT1, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-215	ENST00000586574	FTSJ3	Q8IY81	847 aa	Known RBP	12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	REPS2	Q8NFH8	660 aa		12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	MAFA	Q8NHW3	353 aa	Predicted RBP	12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	MYLIP	Q8WY64	445 aa		12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	ARMT1	Q9H993	441 aa		12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	FBXO28	Q9NVF7	368 aa		12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	SWAP70	Q9UH65	585 aa		12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	NRBP1	Q9UHY1	535 aa		12.9	□□□□□ -0.34
GIT1-215	ENST00000586574	WDR46	O15213	610 aa	Known RBP	12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	ADAMTS4	O75173	837 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	SLC25A27	O95847	323 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	PGK1	P00558	417 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	MYCN	P04198	464 aa	Predicted RBP	12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	PGK2	P07205	417 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	FCER1A	P12319	257 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	CDK8	P49336	464 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	ICA1	Q05084	483 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	C12orf60	Q5U649	245 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	RIOX2	Q8IUF8	465 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	SIRT2	Q8IXJ6	389 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	TINF2	Q9BSI4	451 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	XPNPEP3	Q9NQH7	507 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	SLC5A4	Q9NY91	659 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	ZNF214	Q9UL59	606 aa	Predicted RBP	12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	TACC3	Q9Y6A5	838 aa		12.89	□□□□□ -0.35
GIT1-215	ENST00000586574	COL11A1	P12107	1806 aa	Predicted RBP	12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	VWA5A	O00534	786 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	KIAA0355	O15063	1070 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	EEF2	P13639	858 aa	Known RBP	12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	ADD2	P35612	726 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	PANK1	Q8TE04	598 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	DNAJC2	Q99543	621 aa	Known RBP	12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	ARHGEF10L	Q9HCE6	1279 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	ATP8A2	Q9NTI2	1148 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	DIS3	Q9Y2L1	958 aa	Known RBP	12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	ROBO3	Q96MS0	1386 aa		12.88	□□□□□ -0.35
GIT1-215	ENST00000586574	USP17L12	C9JPN9	530 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	USP17L21	D6R901	530 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	MBD4	O95243	580 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	CLTB	P09497	229 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	STAT3	P40763	770 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	C16orf86	Q6ZW13	317 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	LENG1	Q96BZ8	264 aa	Predicted RBP	12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	CCDC17	Q96LX7	622 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	MMP19	Q99542	508 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.87	□□□□□ -0.35
GIT1-215	ENST00000586574	ZBED9	Q6R2W3	1325 aa		12.87	□□□□□ -0.35
GIT1-215	ENST00000586574		A0A1W2PQ45	241 aa	Predicted RBP	12.86	□□□□□ -0.35
GIT1-215	ENST00000586574		A0A1W2PQY0	241 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	SNAI1	O95863	264 aa	Predicted RBP	12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	RARB	P10826	455 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	IRX5	P78411	483 aa	Predicted RBP	12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	FAAP100	Q0VG06	881 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	HSP90AB4P	Q58FF6	505 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	ANKRD33	Q7Z3H0	272 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	CLASRP	Q8N2M8	674 aa	Known RBP	12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	KLHDC9	Q8NEP7	349 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	KIF1BP	Q96EK5	621 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	TOX2	Q96NM4	488 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	SH2D4A	Q9H788	454 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	PAG1	Q9NWQ8	432 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	PPP1R9A	Q9ULJ8	1098 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	MYH8	P13535	1937 aa		12.86	□□□□□ -0.35
GIT1-215	ENST00000586574	PLXNA1	Q9UIW2	1896 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	TMEM265	A0A087WTH1	108 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	APBB1	O00213	710 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	ATP5J	P18859	108 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	KCTD2	Q14681	263 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	GRIN2C	Q14957	1233 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	FAM83B	Q5T0W9	1011 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	CTR9	Q6PD62	1173 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	C16orf59	Q7L2K0	433 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	RNF180	Q86T96	592 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	USP38	Q8NB14	1042 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	BOLA2	Q9H3K6	86 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	KANSL2	Q9H9L4	492 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	RIPK3	Q9Y572	518 aa		12.85	□□□□□ -0.35
GIT1-215	ENST00000586574	GREB1L	Q9C091	1923 aa	Predicted RBP	12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	MUC3A	Q02505	3323 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	DNAJC25-GNG10	A0A024R161	153 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	MYADML2	A6NDP7	307 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	ADCY6	O43306	1168 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	PQBP1	O60828	265 aa	Known RBP	12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	AKR1A1	P14550	325 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	FOSL2	P15408	326 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	RAG1	P15918	1043 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	CDK7	P50613	346 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	ACLY	P53396	1101 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	UBE3C	Q15386	1083 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	MAMDC4	Q6UXC1	1216 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	RNPC3	Q96LT9	517 aa	Known RBP	12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	HAUS7	Q99871	368 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	TSEN34	Q9BSV6	310 aa	Known RBP	12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	PUS7L	Q9H0K6	701 aa	Known RBP	12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	TBX21	Q9UL17	535 aa		12.84	□□□□□ -0.35
GIT1-215	ENST00000586574	SYNRG	Q9UMZ2	1314 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms