RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 IL17RAQ96F46 866 aa22.46■■□□□ 1.19
DDX39A-204ENST00000586558 UPF2Q9HAU5 1272 aaKnown RBP22.46■■□□□ 1.19
DDX39A-204ENST00000586558 HOXC10Q9NYD6 342 aa22.46■■□□□ 1.19
DDX39A-204ENST00000586558 SH2B2O14492 632 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-204ENST00000586558 LIFRP42702 1097 aa22.45■■□□□ 1.18
DDX39A-204ENST00000586558 CTCFP49711 727 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-204ENST00000586558 HERVK_113P62684 666 aa22.45■■□□□ 1.18
DDX39A-204ENST00000586558 COG2Q14746 738 aa22.45■■□□□ 1.18
DDX39A-204ENST00000586558 LBX2Q6XYB7 198 aa22.45■■□□□ 1.18
DDX39A-204ENST00000586558 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-204ENST00000586558 P2RX7Q99572 595 aaKnown RBP22.45■■□□□ 1.18
DDX39A-204ENST00000586558 LY9Q9HBG7 655 aa22.45■■□□□ 1.18
DDX39A-204ENST00000586558 FLOT1O75955 427 aa22.44■■□□□ 1.18
DDX39A-204ENST00000586558 SNHG28P0DPA3 235 aa22.44■■□□□ 1.18
DDX39A-204ENST00000586558 CASTP20810 708 aaKnown RBP22.44■■□□□ 1.18
DDX39A-204ENST00000586558 RPS6KB1P23443 525 aa22.44■■□□□ 1.18
DDX39A-204ENST00000586558 COL9A3Q14050 684 aaPredicted RBP22.44■■□□□ 1.18
DDX39A-204ENST00000586558 ZSWIM6Q9HCJ5 1215 aa22.44■■□□□ 1.18
DDX39A-204ENST00000586558 FEM1BQ9UK73 627 aa22.44■■□□□ 1.18
DDX39A-204ENST00000586558 FOXN1O15353 648 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 PLA2G6O60733 806 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 PDHBP11177 359 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 C17orf99Q6UX52 265 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 MB21D1Q8N884 522 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 R3HDMLQ9H3Y0 253 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 CYP46A1Q9Y6A2 500 aa22.43■■□□□ 1.18
DDX39A-204ENST00000586558 SPDYE16A6NNV3 312 aaPredicted RBP22.42■■□□□ 1.18
DDX39A-204ENST00000586558 GPR25O00155 361 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 DSG3P32926 999 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 STAT2P52630 851 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 CCDC96Q2M329 555 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 GPATCH4Q5T3I0 446 aaKnown RBP22.42■■□□□ 1.18
DDX39A-204ENST00000586558 RUFY3Q7L099 469 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 CATIPQ7Z7H3 387 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 FAM160B2Q86V87 743 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 SGMS1Q86VZ5 419 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 FBXL16Q8N461 479 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 CHURC1Q8WUH1 139 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 SLF1Q9BQI6 1058 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 PPP1R9AQ9ULJ8 1098 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 ISY1Q9ULR0 285 aaKnown RBP22.42■■□□□ 1.18
DDX39A-204ENST00000586558 MTMR7Q9Y216 660 aa22.42■■□□□ 1.18
DDX39A-204ENST00000586558 CCDC69A6NI79 296 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 HSPA8P11142 646 aaKnown RBP22.41■■□□□ 1.18
DDX39A-204ENST00000586558 BCRP11274 1271 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 ZNF543Q08ER8 600 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 FAM110CQ1W6H9 321 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 ASPRV1Q53RT3 343 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 NFXL1Q6ZNB6 911 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 PRPF38AQ8NAV1 312 aaKnown RBP22.41■■□□□ 1.18
DDX39A-204ENST00000586558 BACH2Q9BYV9 841 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 FBXO28Q9NVF7 368 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 MORF4L1Q9UBU8 362 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 TSKSQ9UJT2 592 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 RABGAP1Q9Y3P9 1069 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 PCNTO95613 3336 aa22.41■■□□□ 1.18
DDX39A-204ENST00000586558 TMEM232C9JQI7 657 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 DDAH1O94760 285 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 FGD1P98174 961 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 KCTD1Q719H9 257 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 MAP3K14Q99558 947 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 LRRC2Q9BYS8 371 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 C22orf23Q9BZE7 217 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 SENP2Q9HC62 589 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 GPHNQ9NQX3 736 aaPredicted RBP22.4■■□□□ 1.18
DDX39A-204ENST00000586558 CPA4Q9UI42 421 aa22.4■■□□□ 1.18
DDX39A-204ENST00000586558 PARP1P09874 1014 aaKnown RBP22.39■■□□□ 1.17
DDX39A-204ENST00000586558 FDX1P10109 184 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 CPA1P15085 419 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 RBM25P49756 843 aaKnown RBP22.39■■□□□ 1.17
DDX39A-204ENST00000586558 TROAPQ12815 778 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 IKQ13123 557 aaPredicted RBP22.39■■□□□ 1.17
DDX39A-204ENST00000586558 BTNL9Q6UXG8 535 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 RASGRP2Q7LDG7 609 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 ZNF654Q8IZM8 581 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 ATG4CQ96DT6 458 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 TCEANC2Q96MN5 208 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 ADAMTS5Q9UNA0 930 aa22.39■■□□□ 1.17
DDX39A-204ENST00000586558 FKTNO75072 461 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 CALM1P0DP23 149 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 CALM2P0DP24 149 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 CALM3P0DP25 149 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 SP3Q02447 781 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 SYNE3Q6ZMZ3 975 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 ANKRD13CQ8N6S4 541 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 AGXT2Q9BYV1 514 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 UPF3BQ9BZI7 483 aaKnown RBP22.38■■□□□ 1.17
DDX39A-204ENST00000586558 RBPJLQ9UBG7 517 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 SLC12A7Q9Y666 1083 aa22.38■■□□□ 1.17
DDX39A-204ENST00000586558 VWA5AO00534 786 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 RCAN1P53805 252 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 GRM4Q14833 912 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 GPRC5AQ8NFJ5 357 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 ZNF296Q8WUU4 475 aaPredicted RBP22.37■■□□□ 1.17
DDX39A-204ENST00000586558 KIFC2Q96AC6 838 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 CHMP4CQ96CF2 233 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 PAGR1Q9BTK6 254 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 GPCPD1Q9NPB8 672 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 A0A0G2JMZ2 1700 aa22.37■■□□□ 1.17
DDX39A-204ENST00000586558 FRMPD2Q68DX3 1309 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms