RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 SH2B1Q9NRF2 756 aaPredicted RBP19.8■□□□□ 0.76
PRKCSH-203ENST00000586486 TESPA1A2RU30 521 aaPredicted RBP19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 MANSC4A6NHS7 340 aaPredicted RBP19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 GOLGA8AA7E2F4 631 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 RAD21O60216 631 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 PARP1P09874 1014 aaKnown RBP19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 KIF5BP33176 963 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 MKRN3Q13064 507 aaKnown RBP19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 ME3Q16798 604 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 FANCBQ8NB91 859 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 TSHZ2Q9NRE2 1034 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 MAD2L2Q9UI95 211 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 NAP1L2Q9ULW6 460 aaPredicted RBP19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 MTMR7Q9Y216 660 aa19.79■□□□□ 0.76
PRKCSH-203ENST00000586486 PALM3A6NDB9 673 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 PFKFB2O60825 505 aa19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 LARGE1O95461 756 aa19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 HSPA6P17066 643 aa19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 RXRAP19793 462 aa19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 CYP4F22Q6NT55 531 aa19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 RBM28Q9NW13 759 aaKnown RBP19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 AGTPBP1Q9UPW5 1226 aa19.78■□□□□ 0.76
PRKCSH-203ENST00000586486 RLFQ13129 1914 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 CCL15-CCL14A0A0B4J2E2 113 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 CCDC196A0A1B0GTZ2 297 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 PLA2G6O60733 806 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 NOGQ13253 232 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 CCL15Q16663 113 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 RTN1Q16799 776 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 CCDC96Q2M329 555 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 FAM83BQ5T0W9 1011 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 GADL1Q6ZQY3 521 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 PAXIP1Q6ZW49 1069 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 RAB11FIP4Q86YS3 637 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 BRI3BPQ8WY22 251 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 CAPNS2Q96L46 248 aa19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 NUP88Q99567 741 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-203ENST00000586486 HOXA7P31268 230 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 GNAQP50148 359 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 INHBEP58166 350 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 KCTD1Q719H9 257 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 GTF3C6Q969F1 213 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 TMX3Q96JJ7 454 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 RPAP3Q9H6T3 665 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 FAM217BQ9NTX9 383 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 SLC45A1Q9Y2W3 748 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 TREML2Q5T2D2 321 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 GPAT2Q6NUI2 795 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 BTNL9Q6UXG8 535 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 CCDC144CPQ8IYA2 1237 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 STAG2Q8N3U4 1231 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 LZTS2Q9BRK4 669 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 FEM1BQ9UK73 627 aa19.76■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L15C9J2P7 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L13C9JLJ4 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L11C9JVI0 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L18D6R9N7 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L22D6RA61 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L17D6RBQ6 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L19D6RCP7 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L20D6RJB6 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 K7ELQ4 463 aaPredicted RBP19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 GOLGA8HP0CJ92 632 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 CDC27P30260 824 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 STAT2P52630 851 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 USP17L24Q0WX57 530 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 SCRN1Q12765 414 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 STK3Q13188 491 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 PABPC4Q13310 644 aaKnown RBP eCLIP19.75■□□□□ 0.751e-8■■□□□ 12.6
PRKCSH-203ENST00000586486 TMTC3Q6ZXV5 915 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 ANKRD23Q86SG2 305 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 CHMP4CQ96CF2 233 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 A0A0G2JMZ2 1700 aa19.75■□□□□ 0.75
PRKCSH-203ENST00000586486 MYPNQ86TC9 1320 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 TMEM232C9JQI7 657 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 KLRF2D3W0D1 207 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 DHX16O60231 1041 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 SMARCA1P28370 1054 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 CCT2P78371 535 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 SREBF2Q12772 1141 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 CATSPERGQ6ZRH7 1159 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 FAM160B2Q86V87 743 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 TANGO6Q9C0B7 1094 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 NCOA5Q9HCD5 579 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 ZCCHC17Q9NP64 241 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 GPCPD1Q9NPB8 672 aa19.74■□□□□ 0.75
PRKCSH-203ENST00000586486 BTBD19C9JJ37 291 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 HTRA3P83110 453 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 REM2Q8IYK8 340 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 CHURC1Q8WUH1 139 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 SPZ1Q9BXG8 430 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 PLEKHA8P1O95397 391 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 ADD1P35611 737 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 NTRK3Q16288 839 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 TTBK2Q6IQ55 1244 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 NECAB1Q8N987 351 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms