RNA–Protein interactions for RNA: ENST00000586261.2

CDK3-203, Transcript of cyclin dependent kinase 3, humanhuman

TSL 5

Gene CDK3, Length 803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-203ENST00000586261 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
CDK3-203ENST00000586261 CYP2D7A0A087X1C5 515 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 RAD21O60216 631 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 ADD2P35612 726 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 CDK8P49336 464 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 SNX17Q15036 470 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
CDK3-203ENST00000586261 MMP19Q99542 508 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 XPNPEP3Q9NQH7 507 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 PDLIM7Q9NR12 457 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 EYSQ5T1H1 3165 aa18.36■□□□□ 0.53
CDK3-203ENST00000586261 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
CDK3-203ENST00000586261 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 USP17L12C9JPN9 530 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 USP17L21D6R901 530 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 RARBP10826 455 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 MS4A1P11836 297 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 EEF2P13639 858 aaKnown RBP18.35■□□□□ 0.53
CDK3-203ENST00000586261 KCTD2Q14681 263 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 COL25A1Q9BXS0 654 aaPredicted RBP18.35■□□□□ 0.53
CDK3-203ENST00000586261 FBXO28Q9NVF7 368 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 NRBP1Q9UHY1 535 aa18.35■□□□□ 0.53
CDK3-203ENST00000586261 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
CDK3-203ENST00000586261 SMIM22K7EJ46 135 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 RAB11FIP3O75154 756 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 PGK2P07205 417 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 TLE2Q04725 743 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 RIOX2Q8IUF8 465 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 GOPCQ9HD26 462 aa18.34■□□□□ 0.53
CDK3-203ENST00000586261 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 ATP5JP18859 108 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 STAT3P40763 770 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 C1orf53Q5VUE5 145 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 RNF180Q86T96 592 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.52
CDK3-203ENST00000586261 CDX2Q99626 313 aaPredicted RBP18.33■□□□□ 0.52
CDK3-203ENST00000586261 TINF2Q9BSI4 451 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.52
CDK3-203ENST00000586261 VCANP13611 3396 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 VWA5AO00534 786 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 PGK1P00558 417 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 CHGBP05060 677 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 UBE3CQ15386 1083 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 HAUS7Q99871 368 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 SEMA6BQ9H3T3 888 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 PPP1R9AQ9ULJ8 1098 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 DIS3Q9Y2L1 958 aaKnown RBP18.32■□□□□ 0.52
CDK3-203ENST00000586261 TACC3Q9Y6A5 838 aa18.32■□□□□ 0.52
CDK3-203ENST00000586261 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 PLXNA1Q9UIW2 1896 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 CLTBP09497 229 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
CDK3-203ENST00000586261 COPB2P35606 906 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 SMAD3P84022 425 aaKnown RBP18.31■□□□□ 0.52
CDK3-203ENST00000586261 ZNF792Q3KQV3 632 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
CDK3-203ENST00000586261 MYH7P12883 1935 aa18.3■□□□□ 0.52
CDK3-203ENST00000586261 PQBP1O60828 265 aaKnown RBP18.3■□□□□ 0.52
CDK3-203ENST00000586261 AKR1A1P14550 325 aa18.3■□□□□ 0.52
CDK3-203ENST00000586261 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
CDK3-203ENST00000586261 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
CDK3-203ENST00000586261 MAFAQ8NHW3 353 aaPredicted RBP18.3■□□□□ 0.52
CDK3-203ENST00000586261 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
CDK3-203ENST00000586261 PRUNE2Q8WUY3 3088 aa18.29■□□□□ 0.52
CDK3-203ENST00000586261 ZBED9Q6R2W3 1325 aa18.29■□□□□ 0.52
CDK3-203ENST00000586261 A0A1W2PQ45 241 aaPredicted RBP18.29■□□□□ 0.52
CDK3-203ENST00000586261 A0A1W2PQY0 241 aa18.29■□□□□ 0.52
CDK3-203ENST00000586261 ZNF865P0CJ78 1059 aaPredicted RBP18.29■□□□□ 0.52
CDK3-203ENST00000586261 RAG1P15918 1043 aa18.29■□□□□ 0.52
CDK3-203ENST00000586261 MYLIPQ8WY64 445 aa18.29■□□□□ 0.52
CDK3-203ENST00000586261 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
CDK3-203ENST00000586261 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
CDK3-203ENST00000586261 ARPP21Q9UBL0 812 aaPredicted RBP18.29■□□□□ 0.52
CDK3-203ENST00000586261 ROBO3Q96MS0 1386 aa18.29■□□□□ 0.52
CDK3-203ENST00000586261 ITGB8P26012 769 aa18.28■□□□□ 0.52
CDK3-203ENST00000586261 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
CDK3-203ENST00000586261 LENG1Q96BZ8 264 aaPredicted RBP18.28■□□□□ 0.52
CDK3-203ENST00000586261 NUP88Q99567 741 aaPredicted RBP18.28■□□□□ 0.52
CDK3-203ENST00000586261 SLF1Q9BQI6 1058 aa18.28■□□□□ 0.52
CDK3-203ENST00000586261 TEX13BQ9BXU2 312 aa18.28■□□□□ 0.52
CDK3-203ENST00000586261 TTYH1Q9H313 450 aaPredicted RBP18.28■□□□□ 0.52
CDK3-203ENST00000586261 TMEM39AQ9NV64 488 aa18.28■□□□□ 0.52
CDK3-203ENST00000586261 KIAA0355O15063 1070 aa18.27■□□□□ 0.52
CDK3-203ENST00000586261 SLC4A3P48751 1232 aa18.27■□□□□ 0.52
CDK3-203ENST00000586261 SNRNP48Q6IEG0 339 aaKnown RBP18.27■□□□□ 0.52
CDK3-203ENST00000586261 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
CDK3-203ENST00000586261 DDX11Q96FC9 970 aa18.27■□□□□ 0.52
CDK3-203ENST00000586261 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms