RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.13	□□□□□ -0.31
DDX5-233	ENST00000585223	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.13	□□□□□ -0.31
DDX5-233	ENST00000585223	LRRC2	Q9BYS8	371 aa		13.13	□□□□□ -0.31
DDX5-233	ENST00000585223	ISY1	Q9ULR0	285 aa	Known RBP	13.13	□□□□□ -0.31
DDX5-233	ENST00000585223	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.13	□□□□□ -0.31
DDX5-233	ENST00000585223	IFIT3	O14879	490 aa	Known RBP	13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	BCR	P11274	1271 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	ZKSCAN1	P17029	563 aa	Predicted RBP	13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	MCC	P23508	829 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	NT5C2	P49902	561 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	CCDC96	Q2M329	555 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	TSGA10IP	Q3SY00	556 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	PPP4R3B	Q5MIZ7	849 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	C17orf99	Q6UX52	265 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	DGKH	Q86XP1	1220 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	ANKRD13C	Q8N6S4	541 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	ATG4C	Q96DT6	458 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	JAKMIP1	Q96N16	626 aa	Known RBP	13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	NEK1	Q96PY6	1258 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	TXNRD2	Q9NNW7	524 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	SYNPO2	Q9UMS6	1093 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	MGAM	O43451	1857 aa		13.12	□□□□□ -0.31
DDX5-233	ENST00000585223	SH2B2	O14492	632 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	CNMD	O75829	334 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	FLOT1	O75955	427 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	BMP3	P12645	472 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	WTAP	Q15007	396 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	TMEM67	Q5HYA8	995 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	IFIT1B	Q5T764	474 aa	Known RBP	13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	KCTD1	Q719H9	257 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	PNMA1	Q8ND90	353 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	CD99L2	Q8TCZ2	262 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	ANKS1A	Q92625	1134 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	GMCL1	Q96IK5	515 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	TTC14	Q96N46	770 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	PAGR1	Q9BTK6	254 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	ARHGAP39	Q9C0H5	1083 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	KAT14	Q9H8E8	782 aa		13.11	□□□□□ -0.31
DDX5-233	ENST00000585223	EPB41L2	O43491	1005 aa	Known RBP	13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	FKTN	O75072	461 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	GOLGA8H	P0CJ92	632 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	PDHB	P11177	359 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	CTGF	P29279	349 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	DSG3	P32926	999 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	MCM5	P33992	734 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	SLC1A4	P43007	532 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	KRT32	Q14532	448 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	CCDC178	Q5BJE1	867 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	TTBK2	Q6IQ55	1244 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	RAB11FIP4	Q86YS3	637 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	IGDCC4	Q8TDY8	1250 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	DCAF4	Q8WV16	495 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	LY9	Q9HBG7	655 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	GPCPD1	Q9NPB8	672 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	BTBD7	Q9P203	1132 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	RBPJL	Q9UBG7	517 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	PPP1R9A	Q9ULJ8	1098 aa		13.1	□□□□□ -0.31
DDX5-233	ENST00000585223	ERICH2	A1L162	156 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	TMEM232	C9JQI7	657 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	SLC16A2	P36021	539 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	GCLC	P48506	637 aa	Predicted RBP	13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	EXOSC10	Q01780	885 aa	Known RBP	13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	SP3	Q02447	781 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	MKRN4P	Q13434	485 aa	Predicted RBP	13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	COG2	Q14746	738 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	NOM1	Q5C9Z4	860 aa	Known RBP	13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	KIFC2	Q96AC6	838 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	SLF1	Q9BQI6	1058 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	MYL10	Q9BUA6	226 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	CPVL	Q9H3G5	476 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	MORF4L1	Q9UBU8	362 aa		13.09	□□□□□ -0.31
DDX5-233	ENST00000585223	SNHG28	P0DPA3	235 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	TAL1	P17542	331 aa	Predicted RBP	13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	CAST	P20810	708 aa	Known RBP	13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	SNAP25	P60880	206 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	ZNF543	Q08ER8	600 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	IK	Q13123	557 aa	Predicted RBP	13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	SART3	Q15020	963 aa	Known RBP	13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	FAM110C	Q1W6H9	321 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223		Q3C1V9	767 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	BLOC1S2	Q6QNY1	142 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	LBX2	Q6XYB7	198 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	DHX32	Q7L7V1	743 aa	Known RBP	13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	TMEM87B	Q96K49	555 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	UPF3B	Q9BZI7	483 aa	Known RBP	13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	FEM1B	Q9UK73	627 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	MYPN	Q86TC9	1320 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	WDR19	Q8NEZ3	1342 aa		13.08	□□□□□ -0.32
DDX5-233	ENST00000585223	PLXNB2	O15031	1838 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	RXRA	P19793	462 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	RPS6KB1	P23443	525 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	ERVK-9	P63128	1117 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	ERVK-24	P63145	666 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	LACTB	P83111	547 aa	Predicted RBP	13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	NFXL1	Q6ZNB6	911 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	ZNF654	Q8IZM8	581 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	REPS2	Q8NFH8	660 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	ERO1A	Q96HE7	468 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	PORCN	Q9H237	461 aa		13.07	□□□□□ -0.32
DDX5-233	ENST00000585223	PRDM10	Q9NQV6	1147 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms