RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SPAG1Q07617 926 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 RRAGBQ5VZM2 374 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 NSUN4Q96CB9 384 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CDC23Q9UJX2 597 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TTF2Q9UNY4 1162 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CCDC151A5D8V7 595 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 N4BP3O15049 544 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TUBB2AQ13885 445 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TMTC1Q8IUR5 882 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TUBB2BQ9BVA1 445 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CDCA7Q9BWT1 371 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 DCP1AQ9NPI6 582 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 A0A0G2JS52 829 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 MCM7P33993 719 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 EVX2Q03828 476 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 PAK1Q13153 545 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ARL6IP4Q66PJ3 421 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ACSBG1Q96GR2 724 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 FUT8Q9BYC5 575 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TAF1P21675 1872 aa16.05■□□□□ 0.16
CDK5RAP3-237ENST00000585163 VEGFAP15692 232 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ZNF569Q5MCW4 686 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 FBXO33Q7Z6M2 555 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CEP112Q8N8E3 955 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 COL16A1Q07092 1604 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 COBLO75128 1261 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 COPB1P53618 953 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 MECOMQ03112 1051 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 BRD3Q15059 726 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 DDB1Q16531 1140 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 RMND1Q9NWS8 449 aa16.04■□□□□ 0.16
CDK5RAP3-237ENST00000585163 MYH8P13535 1937 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 LONP1P36776 959 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ERVK-24P63145 666 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TRIM14Q14142 442 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 NELFBQ8WX92 580 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CRNKL1Q9BZJ0 848 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 VPS16Q9H269 839 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 BCCIPQ9P287 314 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 MYH13Q9UKX3 1938 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 PDS5AQ29RF7 1337 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 LAMB1P07942 1786 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CTAGE9A4FU28 777 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ERICH4A6NGS2 130 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 RPN1P04843 607 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CYP26C1Q6V0L0 522 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
CDK5RAP3-237ENST00000585163 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 RNF225M0QZC1 329 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 POLR3GO15318 223 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CALML3P27482 149 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TUBB4BP68371 445 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 KCNJ12Q14500 433 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SBK1Q52WX2 424 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 RCSD1Q6JBY9 416 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TEX2Q8IWB9 1127 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 HNRNPLLQ8WVV9 542 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ANKZF1Q9H8Y5 726 aa16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-237ENST00000585163 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KIF5BP33176 963 aa16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KIF4BQ2VIQ3 1234 aa16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SLC35F6Q8N357 371 aa16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CELF1Q92879 486 aaKnown RBP16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MYO1AQ9UBC5 1043 aa16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PUF60Q9UHX1 559 aaKnown RBP16.02■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ADAMTS2O95450 1211 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CDC25AP30304 524 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PRCPP42785 496 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 RAB21Q9UL25 225 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TSPY2A6NKD2 308 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MAP2K7O14733 419 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ABL1P00519 1130 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KLRK1P26718 216 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ARHGAP25P42331 645 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms