RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 C1orf53Q5VUE5 145 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 SH3RF1Q7Z6J0 888 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.54□□□□□ -0.4
CASC3-210ENST00000584997 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 DDRGK1Q96HY6 314 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 CCDC17Q96LX7 622 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 MMP19Q99542 508 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
CASC3-210ENST00000584997 XPNPEP3Q9NQH7 507 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 MYH7P12883 1935 aa12.54□□□□□ -0.4
CASC3-210ENST00000584997 TRIM43BA6NCK2 446 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 RAD21O60216 631 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 MBD4O95243 580 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 SMAD3P84022 425 aaKnown RBP12.53□□□□□ -0.4
CASC3-210ENST00000584997 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC3-210ENST00000584997 KCTD2Q14681 263 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 TMEM132BQ14DG7 1078 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 RNF180Q86T96 592 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 MAFAQ8NHW3 353 aaPredicted RBP12.53□□□□□ -0.4
CASC3-210ENST00000584997 PANK1Q8TE04 598 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 TRIM43Q96BQ3 446 aaPredicted RBP12.53□□□□□ -0.4
CASC3-210ENST00000584997 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 ATP8A2Q9NTI2 1148 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 NRBP1Q9UHY1 535 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 EYSQ5T1H1 3165 aa12.53□□□□□ -0.4
CASC3-210ENST00000584997 PRKAB2O43741 272 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 HMMRO75330 724 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
CASC3-210ENST00000584997 PGK2P07205 417 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 CLTBP09497 229 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 CDK8P49336 464 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 TLE2Q04725 743 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 SIAH1Q8IUQ4 282 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.41
CASC3-210ENST00000584997 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.414e-7■□□□□ 8.7
CASC3-210ENST00000584997 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 PHF24Q9UPV7 400 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 PRUNE2Q8WUY3 3088 aa12.52□□□□□ -0.41
CASC3-210ENST00000584997 CYP2D7A0A087X1C5 515 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 USP17L12C9JPN9 530 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 USP17L21D6R901 530 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 PQBP1O60828 265 aaKnown RBP12.51□□□□□ -0.41
CASC3-210ENST00000584997 PGK1P00558 417 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
CASC3-210ENST00000584997 FOSL2P15408 326 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 RAG1P15918 1043 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 COPB2P35606 906 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 ADD2P35612 726 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 STAT3P40763 770 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 C16orf86Q6ZW13 317 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 RIOX2Q8IUF8 465 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 MYLIPQ8WY64 445 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 BOLA2Q9H3K6 86 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 KANSL2Q9H9L4 492 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 FBXO28Q9NVF7 368 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 CNPY2Q9Y2B0 182 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
CASC3-210ENST00000584997 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
CASC3-210ENST00000584997 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
CASC3-210ENST00000584997 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 VWA5AO00534 786 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 AKR1A1P14550 325 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 TTYH1Q9H313 450 aaPredicted RBP12.5□□□□□ -0.41
CASC3-210ENST00000584997 PPP1R9AQ9ULJ8 1098 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
CASC3-210ENST00000584997 VCANP13611 3396 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 RAB11FIP3O75154 756 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 MS4A1P11836 297 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 TAL1P17542 331 aaPredicted RBP12.49□□□□□ -0.41
CASC3-210ENST00000584997 ITGB8P26012 769 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 FPGSQ05932 587 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 ZNF792Q3KQV3 632 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 RPAP2Q8IXW5 612 aaPredicted RBP12.49□□□□□ -0.41
CASC3-210ENST00000584997 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
CASC3-210ENST00000584997 TMEM39AQ9NV64 488 aa12.49□□□□□ -0.41
CASC3-210ENST00000584997 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
CASC3-210ENST00000584997 MYO9BQ13459 2157 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 KIAA0355O15063 1070 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
CASC3-210ENST00000584997 ATP5JP18859 108 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 UBE3CQ15386 1083 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 CTR9Q6PD62 1173 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 NUP133Q8WUM0 1156 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 HAUS7Q99871 368 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 TSEN34Q9BSV6 310 aaKnown RBP12.48□□□□□ -0.41
CASC3-210ENST00000584997 STARD7Q9NQZ5 370 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
CASC3-210ENST00000584997 MYH4Q9Y623 1939 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms