RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 DDAH1O94760 285 aa17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 TROAPQ12815 778 aa17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CPLX2Q6PUV4 134 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 METTL16Q86W50 562 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 BPIFA3Q9BQP9 254 aa17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CALM1P0DP23 149 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CALM2P0DP24 149 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CALM3P0DP25 149 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 EPS15P42566 896 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TNNI2P48788 182 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 RBM10P98175 930 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 NTRK3Q16288 839 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CDAN1Q8IWY9 1227 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MRPS27Q92552 414 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PYCARDQ9ULZ3 195 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CDKL5O76039 1030 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PTGS1P23219 599 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 SYCP1Q15431 976 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TRPM4Q8TD43 1214 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CLIP2Q9UDT6 1046 aa17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 GREB1LQ9C091 1923 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 ME1P48163 572 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 RASA3Q14644 834 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PHKBQ93100 1093 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 C8orf76Q96K31 380 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MTMR4Q9NYA4 1195 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PGAP2Q9UHJ9 254 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PAXBP1Q9Y5B6 917 aa17.19■□□□□ 0.34
CDK5RAP3-236ENST00000584991 IGKV6D-41A0A0C4DH26 115 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 BECN2A8MW95 431 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 GRIN3BO60391 1043 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 NOVP48745 357 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 FOSBP53539 338 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PPP2R5BQ15173 497 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 IFNAR1P17181 557 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 FSIP1Q8NA03 581 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 KCND1Q9NSA2 647 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CTIFO43310 598 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 GDF11O95390 407 aa17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 SSRP1Q08945 709 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MYH6P13533 1939 aa17.17■□□□□ 0.34
CDK5RAP3-236ENST00000584991 PLEKHA8P1O95397 391 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MIGA2Q7L4E1 593 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TIGD1Q96MW7 591 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 IMPACTQ9P2X3 320 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 FMNL1O95466 1100 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TTLL1O95922 423 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 GSDMDP57764 484 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 STK38Q15208 465 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 NBPF11Q86T75 865 aa17.16■□□□□ 0.34
CDK5RAP3-236ENST00000584991 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TBC1D12O60347 775 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MYSM1Q5VVJ2 828 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 LRRC8AQ8IWT6 810 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 C17orf53Q8N3J3 647 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 AIFM3Q96NN9 605 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms