RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 EPB41L4BQ9H329 900 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 RNF19AQ9NV58 838 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 CRIM1Q9NZV1 1036 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 VTI1BQ9UEU0 232 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 MYOM3Q5VTT5 1437 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 DDX3YO15523 660 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 FZD6O60353 706 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 C22orf34Q6ZV56 151 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 THEMISQ8N1K5 641 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 SREK1Q8WXA9 508 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 GSX1Q9H4S2 264 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 CCSER2Q9H7U1 834 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 NRKQ7Z2Y5 1582 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 ROCK1Q13464 1354 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 XRN1Q8IZH2 1706 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 ARHGEF28Q8N1W1 1705 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 TNNI2P48788 182 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 COL13A1Q5TAT6 717 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 TOP6BLQ8N6T0 577 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 FLAD1Q8NFF5 587 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 FOXD3Q9UJU5 478 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 PCDHA4Q9UN74 947 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 ACTL7BQ9Y614 415 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 EFCAB6Q5THR3 1501 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 RPRD2Q5VT52 1461 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 TNS2Q63HR2 1409 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 PLCH1Q4KWH8 1693 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 PRR19A6NJB7 356 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 NAT2P11245 290 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 LIG1P18858 919 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 ZNF385BQ569K4 471 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 KCNK4Q9NYG8 393 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 RAPGEFL1Q9UHV5 662 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 ERBINQ96RT1 1412 aa2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 CICQ96RK0 1608 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-211ENST00000584897 GLI1P08151 1106 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ITGB5P18084 799 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 LAPTM5Q13571 262 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 SLC14A2Q15849 920 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 LRRFIP1Q32MZ4 808 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 PPP1R13LQ8WUF5 828 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 PUS7Q96PZ0 661 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 MIR1-1HGQ9H1L0 117 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 CHRDQ9H2X0 955 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 PALD1Q9ULE6 856 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ABCA3Q99758 1704 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ADGRL2O95490 1459 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 PNPLA6Q8IY17 1366 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 CCNB3Q8WWL7 1395 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ROBO2Q9HCK4 1378 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ARHGAP5Q13017 1502 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 DUOX2Q9NRD8 1548 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 POLR3DP05423 398 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 CTSHP09668 335 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ARL4AP40617 200 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ZC3H6P61129 1189 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ZP2Q05996 745 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 PSMD2Q13200 908 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 VPS37DQ86XT2 251 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 JMYQ8N9B5 988 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 FANCD2OSQ96PS1 177 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TANGO6Q9C0B7 1094 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ADAM30Q9UKF2 790 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 MYOM2P54296 1465 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ERVK-7P63135 1459 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 MTUS2Q5JR59 1369 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 CCDC141Q6ZP82 1450 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 LRRC10BA6NIK2 292 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 NFKBIEO00221 500 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 WISP1O95388 367 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 SPRED3Q2MJR0 410 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 CDPF1Q6NVV7 123 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TMC7Q7Z402 723 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TMEM87AQ8NBN3 555 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ENOX1Q8TC92 643 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 RNF34Q969K3 372 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ASB16Q96NS5 453 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TCF12Q99081 682 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TINF2Q9BSI4 451 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 BCO2Q9BYV7 579 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 MSH6P52701 1360 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TMEM94Q12767 1356 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 LMTK2Q8IWU2 1503 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 PNMA6FA0A0J9YX94 578 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 TMPRSS2O15393 492 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 GDNFP39905 211 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 CAP2P40123 477 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ZNF792Q3KQV3 632 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ATCAYQ86WG3 371 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 BCL7CQ8WUZ0 217 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 EAF1Q96JC9 268 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 GMLQ99445 158 aa2.66□□□□□ -1.98
SMCHD1-211ENST00000584897 ARHGAP31Q2M1Z3 1444 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 LRRIQ1Q96JM4 1722 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 PRAG1Q86YV5 1406 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 A0A1W2PQ27 194 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 A0A1W2PQ64 194 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 A0A1W2PQC6 194 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 A0A1W2PQD8 194 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 TREHO43280 583 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms