RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 ANTXR1Q9H6X2 564 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 TMEM59LQ9UK28 342 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 PPT2Q9UMR5 302 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 SRFP11831 508 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 RAG1P15918 1043 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 ARID5AQ03989 594 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 OVOS1Q6IE37 1185 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 PRR23BQ6ZRT6 265 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 NLRC3Q7RTR2 1065 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 ABHD4Q8TB40 342 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 ARMC5Q96C12 935 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 FERD3LQ96RJ6 166 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
PPP4R1-227ENST00000583988 SHISA3A0PJX4 238 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 TNFRSF10CO14798 259 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 CCNFP41002 786 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 GIPRP48546 466 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 JAG1P78504 1218 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 MESP2Q0VG99 397 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 MYLIPQ8WY64 445 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 VWCEQ96DN2 955 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 DIRC2Q96SL1 478 aa6.29□□□□□ -1.4
PPP4R1-227ENST00000583988 UBOX5O94941 541 aa6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 TRHRP34981 398 aaPredicted RBP6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 FBXW10Q5XX13 1052 aa6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 TAB3Q8N5C8 712 aaPredicted RBP6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 OR6P1Q8NGX9 317 aa6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 SYTL4Q96C24 671 aaPredicted RBP6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 CRBNQ96SW2 442 aa6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 SRRTQ9BXP5 876 aaKnown RBP6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
PPP4R1-227ENST00000583988 ACRP10323 421 aa6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 EIF6P56537 245 aaKnown RBP6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 CCDC81Q6ZN84 652 aa6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 SHDQ96IW2 340 aa6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 SLC9A7Q96T83 725 aa6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 NSUN3Q9H649 340 aaKnown RBP6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 C19orf44Q9H6X5 657 aa6.27□□□□□ -1.41
PPP4R1-227ENST00000583988 LSRQ86X29 649 aaPredicted RBP6.26□□□□□ -1.41
PPP4R1-227ENST00000583988 CPLX3Q8WVH0 158 aa6.26□□□□□ -1.41
PPP4R1-227ENST00000583988 KCNK12Q9HB15 430 aa6.26□□□□□ -1.41
PPP4R1-227ENST00000583988 DBX1A6NMT0 343 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 HPXP02790 462 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 FGRP09769 529 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 ZGLP1P0C6A0 271 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 GUCY2CP25092 1073 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 RNF4P78317 190 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 NMIQ13287 307 aaPredicted RBP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 RUFY4Q6ZNE9 571 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 SYDE1Q6ZW31 735 aaPredicted RBP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 PDZD8Q8NEN9 1154 aa6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 SREK1Q8WXA9 508 aaKnown RBP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 ZNF512BQ96KM6 892 aaPredicted RBP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 DCP1AQ9NPI6 582 aaPredicted RBP6.25□□□□□ -1.41
PPP4R1-227ENST00000583988 DNAJA1P31689 397 aaKnown RBP6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 CASP7P55210 303 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 NBPF12Q5TAG4 269 aaPredicted RBP6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 MCF2L2Q86YR7 1114 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 TMEM192Q8IY95 271 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 OXR1Q8N573 874 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 C19orf47Q8N9M1 422 aaKnown RBP6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 DHRS1Q96LJ7 313 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 DRC1Q96MC2 740 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
PPP4R1-227ENST00000583988 CLEC3AO75596 197 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 SSBP05455 408 aaKnown RBP eCLIP6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 ATP2B1P20020 1258 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 RAP1GAPP47736 663 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 TEKQ02763 1124 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 TIGD5Q53EQ6 642 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 UNC5AQ6ZN44 842 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 TMC3Q7Z5M5 1100 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 FBXO15Q8NCQ5 510 aaPredicted RBP6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 PPP1R16BQ96T49 567 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 TANGO6Q9C0B7 1094 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 EPB41L4BQ9H329 900 aa6.23□□□□□ -1.41
PPP4R1-227ENST00000583988 SSU72P8A0A1W2PR75 194 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 FITM1A5D6W6 292 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 FAM86C2PA6NEL3 165 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 RPL10P27635 214 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 SNW1Q13573 536 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 ZYXQ15942 572 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 NBPF9Q3BBW0 867 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 SOGA3Q5TF21 947 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 ENOX1Q8TC92 643 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 SYTL5Q8TDW5 730 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms