RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 F6X3S4 739 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 P4HBP07237 508 aaKnown RBP7.54□□□□□ -1.2
PRKCA-205ENST00000583775 MTX1Q13505 466 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 BEND3Q5T5X7 828 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 TTC22Q5TAA0 569 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 XKR5Q6UX68 686 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 MPRIPQ6WCQ1 1025 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.54□□□□□ -1.2
PRKCA-205ENST00000583775 MAP4K3Q8IVH8 894 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 SSH3Q8TE77 659 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 PLD4Q96BZ4 506 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 C22orf23Q9BZE7 217 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 SLC52A2Q9HAB3 445 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
PRKCA-205ENST00000583775 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 STAP2Q9UGK3 403 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 GLI3P10071 1580 aa7.54□□□□□ -1.2
PRKCA-205ENST00000583775 UTYO14607 1347 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 AOX1Q06278 1338 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 WDR17Q8IZU2 1322 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 SALL3Q9BXA9 1300 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 PNMA6FA0A0J9YX94 578 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 EIF1AYO14602 144 aaKnown RBP7.53□□□□□ -1.2
PRKCA-205ENST00000583775 TREHO43280 583 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 RAB11FIP3O75154 756 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 CDC45O75419 566 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 DSC3Q14574 896 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 ZNF790Q6PG37 636 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 SLC4A10Q6U841 1118 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 DTX1Q86Y01 620 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
PRKCA-205ENST00000583775 DNAAF4Q8WXU2 420 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 SNX21Q969T3 373 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 DMRTB1Q96MA1 342 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 KRTAP4-9Q9BYQ8 210 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 SRCIN1Q9C0H9 1055 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 NLRP2Q9NX02 1062 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 CCDC9Q9Y3X0 531 aaKnown RBP7.53□□□□□ -1.2
PRKCA-205ENST00000583775 ADCY9O60503 1353 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 COL15A1P39059 1388 aa7.53□□□□□ -1.2
PRKCA-205ENST00000583775 COL5A2P05997 1499 aaPredicted RBP7.53□□□□□ -1.2
PRKCA-205ENST00000583775 AHDC1Q5TGY3 1603 aaPredicted RBP7.52□□□□□ -1.2
PRKCA-205ENST00000583775 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 EPB41L2O43491 1005 aaKnown RBP7.52□□□□□ -1.21
PRKCA-205ENST00000583775 KCNQ3O43525 872 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 UBTFL1P0CB47 393 aaPredicted RBP7.52□□□□□ -1.21
PRKCA-205ENST00000583775 SIK1P57059 783 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 KSR2Q6VAB6 950 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 NCAPG2Q86XI2 1143 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 NPAS4Q8IUM7 802 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 IL22RA1Q8N6P7 574 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 OR13H1Q8NG92 308 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 EPS8L3Q8TE67 593 aaKnown RBP7.52□□□□□ -1.21
PRKCA-205ENST00000583775 CSRNP1Q96S65 589 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 CARD10Q9BWT7 1032 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 CHPF2Q9P2E5 772 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 STOML1Q9UBI4 398 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 AK9Q5TCS8 1911 aa7.52□□□□□ -1.21
PRKCA-205ENST00000583775 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.21
PRKCA-205ENST00000583775 COL14A1Q05707 1796 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 PLCH1Q4KWH8 1693 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 PI4KAP2A4QPH2 592 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 ERVV-2B6SEH9 535 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 CYP27B1O15528 508 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 DDX58O95786 925 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 GSPT1P15170 499 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 EIF2AK2P19525 551 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 ATP11AP98196 1134 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 HSP90AB4PQ58FF6 505 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 PI4KAP1Q8N8J0 262 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 LINS1Q8NG48 757 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 SNX29Q8TEQ0 813 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 DDX17Q92841 729 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 LRRCC1Q9C099 1032 aa7.51□□□□□ -1.21
PRKCA-205ENST00000583775 PHAXQ9H814 394 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 USP42Q9H9J4 1324 aaKnown RBP7.51□□□□□ -1.21
PRKCA-205ENST00000583775 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
PRKCA-205ENST00000583775 SNRPA1P09661 255 aaKnown RBP7.5□□□□□ -1.21
PRKCA-205ENST00000583775 GLB1P16278 677 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 EIF2S2P20042 333 aaKnown RBP7.5□□□□□ -1.21
PRKCA-205ENST00000583775 SOX18P35713 384 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 PDE1AP54750 535 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 HYAL2Q12891 473 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 INTS5Q6P9B9 1019 aaKnown RBP7.5□□□□□ -1.21
PRKCA-205ENST00000583775 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 GALNT11Q8NCW6 608 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 RGS22Q8NE09 1264 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 IL17RAQ96F46 866 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 ANTXR1Q9H6X2 564 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 LRRFIP2Q9Y608 721 aaKnown RBP7.5□□□□□ -1.21
PRKCA-205ENST00000583775 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 WNK3Q9BYP7 1800 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 PCDH11XQ9BZA7 1347 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 PCDH11YQ9BZA8 1340 aa7.5□□□□□ -1.21
PRKCA-205ENST00000583775 LRP6O75581 1613 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms