RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
CASC3-208ENST00000583649 IL23AQ9NPF7 189 aa13.57□□□□□ -0.24
CASC3-208ENST00000583649 A0A0U1RQG5 324 aaPredicted RBP13.56□□□□□ -0.24
CASC3-208ENST00000583649 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
CASC3-208ENST00000583649 MCAMP43121 646 aa13.56□□□□□ -0.24
CASC3-208ENST00000583649 TFF2Q03403 129 aa13.56□□□□□ -0.24
CASC3-208ENST00000583649 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
CASC3-208ENST00000583649 KCNA10Q16322 511 aa13.56□□□□□ -0.24
CASC3-208ENST00000583649 TMED8Q6PL24 325 aaPredicted RBP13.56□□□□□ -0.24
CASC3-208ENST00000583649 ACER1Q8TDN7 264 aa13.56□□□□□ -0.24
CASC3-208ENST00000583649 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
CASC3-208ENST00000583649 ARVCFO00192 962 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 ADAMTS4O75173 837 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 GNAI3P08754 354 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 ACRP10323 421 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 DSG3P32926 999 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 KCNQ1P51787 676 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 HLA-CQ95604 372 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
CASC3-208ENST00000583649 DUSP11O75319 330 aaKnown RBP13.54□□□□□ -0.24
CASC3-208ENST00000583649 POLR3DP05423 398 aaPredicted RBP13.54□□□□□ -0.24
CASC3-208ENST00000583649 C6orf222P0C671 652 aaPredicted RBP13.54□□□□□ -0.24
CASC3-208ENST00000583649 CYP7A1P22680 504 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 C16orf59Q7L2K0 433 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 SSH1Q8WYL5 1049 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 SNX27Q96L92 541 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
CASC3-208ENST00000583649 SMC4Q9NTJ3 1288 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
CASC3-208ENST00000583649 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
CASC3-208ENST00000583649 ZNF865P0CJ78 1059 aaPredicted RBP13.53□□□□□ -0.24
CASC3-208ENST00000583649 POU3F3P20264 500 aaPredicted RBP13.53□□□□□ -0.24
CASC3-208ENST00000583649 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
CASC3-208ENST00000583649 CDK7P50613 346 aa13.53□□□□□ -0.24
CASC3-208ENST00000583649 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
CASC3-208ENST00000583649 OTOP2Q7RTS6 562 aa13.53□□□□□ -0.24
CASC3-208ENST00000583649 KLHDC9Q8NEP7 349 aa13.53□□□□□ -0.24
CASC3-208ENST00000583649 NCOR1O75376 2440 aa13.53□□□□□ -0.24
CASC3-208ENST00000583649 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
CASC3-208ENST00000583649 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 PRR33A8MZF0 331 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 CABYRO75952 493 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 ASGR1P07306 291 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 PFKMP08237 780 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 SEPT2Q15019 361 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 ZNF792Q3KQV3 632 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 GNASQ5JWF2 1037 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 RIOX2Q8IUF8 465 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 KCNH6Q9H252 994 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 HIPK3Q9H422 1215 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
CASC3-208ENST00000583649 ZHX1Q9UKY1 873 aaPredicted RBP13.52□□□□□ -0.25
CASC3-208ENST00000583649 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 E9PSI1 815 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
CASC3-208ENST00000583649 PGK2P07205 417 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 ALADP13716 330 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 ATP2A2P16615 1042 aaKnown RBP13.51□□□□□ -0.25
CASC3-208ENST00000583649 STAT3P40763 770 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 MRE11P49959 708 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 ATG4CQ96DT6 458 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
CASC3-208ENST00000583649 YBX2Q9Y2T7 364 aaKnown RBP13.51□□□□□ -0.25
CASC3-208ENST00000583649 BDP1A6H8Y1 2624 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 TLL1O43897 1013 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 ZEB2O60315 1214 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
CASC3-208ENST00000583649 ACTN1P12814 892 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 CYP2C18P33260 490 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 SHMT1P34896 483 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 DYNLL1P63167 89 aaKnown RBP13.5□□□□□ -0.25
CASC3-208ENST00000583649 MTX1Q13505 466 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 TMEM132BQ14DG7 1078 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
CASC3-208ENST00000583649 UIMC1Q96RL1 719 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 MTCH2Q9Y6C9 303 aa13.5□□□□□ -0.25
CASC3-208ENST00000583649 TCF20Q9UGU0 1960 aaKnown RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 CYP2E1P05181 493 aaPredicted RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 TAL1P17542 331 aaPredicted RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 RABGGTBP53611 331 aa13.49□□□□□ -0.25
CASC3-208ENST00000583649 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
CASC3-208ENST00000583649 ABHD16BQ9H3Z7 469 aa13.49□□□□□ -0.25
CASC3-208ENST00000583649 GPR108Q9NPR9 543 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms