RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
CCDC57-218ENST00000583593 LRRC41Q15345 812 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 FAM47AQ5JRC9 791 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 CCDC17Q96LX7 622 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 HAUS7Q99871 368 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
CCDC57-218ENST00000583593 CUL9Q8IWT3 2517 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-218ENST00000583593 KBTBD13C9JR72 458 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 HMMRO75330 724 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 FCER1AP12319 257 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 ADCYAP1R1P41586 468 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 UBE3CQ15386 1083 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 SHHQ15465 462 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 C9orf50Q5SZB4 431 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-218ENST00000583593 SH3RF1Q7Z6J0 888 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 REPS2Q8NFH8 660 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC57-218ENST00000583593 PUS7LQ9H0K6 701 aaKnown RBP16.23■□□□□ 0.19
CCDC57-218ENST00000583593 SLC5A4Q9NY91 659 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 PRKAG2Q9UGJ0 569 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
CCDC57-218ENST00000583593 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 SLC25A27O95847 323 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 MS4A1P11836 297 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 ZNF792Q3KQV3 632 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 RIOX2Q8IUF8 465 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 BADQ92934 168 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 TRIM43Q96BQ3 446 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-218ENST00000583593 PDLIM7Q9NR12 457 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 ZNF214Q9UL59 606 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-218ENST00000583593 PRUNE2Q8WUY3 3088 aa16.22■□□□□ 0.19
CCDC57-218ENST00000583593 VWA5AO00534 786 aa16.21■□□□□ 0.19
CCDC57-218ENST00000583593 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-218ENST00000583593 PGK2P07205 417 aa16.21■□□□□ 0.19
CCDC57-218ENST00000583593 TAL1P17542 331 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-218ENST00000583593 C1orf53Q5VUE5 145 aa16.21■□□□□ 0.19
CCDC57-218ENST00000583593 MMP19Q99542 508 aa16.21■□□□□ 0.19
CCDC57-218ENST00000583593 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC57-218ENST00000583593 KANSL2Q9H9L4 492 aa16.21■□□□□ 0.19
CCDC57-218ENST00000583593 SLC4A4Q9Y6R1 1079 aa16.21■□□□□ 0.19
CCDC57-218ENST00000583593 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
CCDC57-218ENST00000583593 ITGB8P26012 769 aa16.2■□□□□ 0.18
CCDC57-218ENST00000583593 STAT3P40763 770 aa16.2■□□□□ 0.18
CCDC57-218ENST00000583593 TINF2Q9BSI4 451 aa16.2■□□□□ 0.18
CCDC57-218ENST00000583593 PRDM5Q9NQX1 630 aaPredicted RBP16.2■□□□□ 0.18
CCDC57-218ENST00000583593 NRBP1Q9UHY1 535 aa16.2■□□□□ 0.18
CCDC57-218ENST00000583593 PPP1R9AQ9ULJ8 1098 aa16.2■□□□□ 0.18
CCDC57-218ENST00000583593 PHF24Q9UPV7 400 aa16.2■□□□□ 0.18
CCDC57-218ENST00000583593 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
CCDC57-218ENST00000583593 PGK1P00558 417 aa16.19■□□□□ 0.18
CCDC57-218ENST00000583593 TLE2Q04725 743 aa16.19■□□□□ 0.18
CCDC57-218ENST00000583593 FAM83BQ5T0W9 1011 aa16.19■□□□□ 0.18
CCDC57-218ENST00000583593 XPNPEP3Q9NQH7 507 aa16.19■□□□□ 0.18
CCDC57-218ENST00000583593 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
CCDC57-218ENST00000583593 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-218ENST00000583593 RARBP10826 455 aa16.18■□□□□ 0.18
CCDC57-218ENST00000583593 ZNF697Q5TEC3 545 aa16.18■□□□□ 0.18
CCDC57-218ENST00000583593 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC57-218ENST00000583593 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
CCDC57-218ENST00000583593 STRBPQ96SI9 672 aaKnown RBP16.18■□□□□ 0.18
CCDC57-218ENST00000583593 NUP88Q99567 741 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-218ENST00000583593 COL25A1Q9BXS0 654 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-218ENST00000583593 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
CCDC57-218ENST00000583593 RIPK3Q9Y572 518 aa16.18■□□□□ 0.18
CCDC57-218ENST00000583593 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
CCDC57-218ENST00000583593 ADAMTS4O75173 837 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 RASA1P20936 1047 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 EPHB4P54760 987 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 KCTD2Q14681 263 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 SBK1Q52WX2 424 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
CCDC57-218ENST00000583593 DDRGK1Q96HY6 314 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 CDX2Q99626 313 aaPredicted RBP16.17■□□□□ 0.18
CCDC57-218ENST00000583593 SEMA6BQ9H3T3 888 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 ARPP21Q9UBL0 812 aaPredicted RBP16.17■□□□□ 0.18
CCDC57-218ENST00000583593 TACC3Q9Y6A5 838 aa16.17■□□□□ 0.18
CCDC57-218ENST00000583593 A0A1W2PQ45 241 aaPredicted RBP16.16■□□□□ 0.18
CCDC57-218ENST00000583593 A0A1W2PQY0 241 aa16.16■□□□□ 0.18
CCDC57-218ENST00000583593 GSG1L2A8MUP6 293 aa16.16■□□□□ 0.18
CCDC57-218ENST00000583593 RAD21O60216 631 aa16.16■□□□□ 0.18
CCDC57-218ENST00000583593 ZSCAN25Q6NSZ9 544 aa16.16■□□□□ 0.18
CCDC57-218ENST00000583593 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
CCDC57-218ENST00000583593 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
CCDC57-218ENST00000583593 TTYH1Q9H313 450 aaPredicted RBP16.16■□□□□ 0.18
CCDC57-218ENST00000583593 DNAJC25-GNG10A0A024R161 153 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 F5H6K3 240 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 SNAI1O95863 264 aaPredicted RBP16.15■□□□□ 0.18
CCDC57-218ENST00000583593 CLTBP09497 229 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 AKR1A1P14550 325 aa16.15■□□□□ 0.18
CCDC57-218ENST00000583593 SMAD3P84022 425 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms