RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZNF451Q9Y4E5 1061 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 FAM155AB1AL88 458 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 CYP26A1O43174 497 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 WNT11O96014 354 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 KIR3DL1P43629 444 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 ADAT2Q7Z6V5 191 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 COX4I2Q96KJ9 171 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 PRDM14Q9GZV8 571 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 KCNH3Q9ULD8 1083 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
SMARCE1-219ENST00000583294 CBFA2T2O43439 604 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 SUSD5O60279 629 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 OXCT1P55809 520 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 TNK2Q07912 1038 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 CDKAL1Q5VV42 579 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 EEPD1Q7L9B9 569 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 PPP1R14AQ96A00 147 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 KRTAP4-12Q9BQ66 201 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 SUSD2Q9UGT4 822 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 PCDHB12Q9Y5F1 795 aa8.43□□□□□ -1.06
SMARCE1-219ENST00000583294 LOC105371045A0A1W2PR82 267 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 ZNF865P0CJ78 1059 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 TAL1P17542 331 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 CD247P20963 164 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 IFRD2Q12894 506 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 TCEAL1Q15170 157 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 SV2CQ496J9 727 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 TMC3Q7Z5M5 1100 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 PLD6Q8N2A8 252 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 ADCY4Q8NFM4 1077 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 BRF1Q92994 677 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 DNAJC7Q99615 494 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 APBA2Q99767 749 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 KLHL25Q9H0H3 589 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 GP6Q9HCN6 339 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 PFDN2Q9UHV9 154 aa8.42□□□□□ -1.06
SMARCE1-219ENST00000583294 ANKRD34BA5PLL1 514 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 SHOXO15266 292 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 FOSL1P15407 271 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 NKPD1Q17RQ9 610 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 MTERF2Q49AM1 385 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 ANKRD39Q53RE8 183 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 NOL9Q5SY16 702 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 C22orf34Q6ZV56 151 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 GFOD1Q9NXC2 390 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 APEX2Q9UBZ4 518 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 MINPP1Q9UNW1 487 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 PLAGL2Q9UPG8 496 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 SUGT1Q9Y2Z0 365 aa8.41□□□□□ -1.06
SMARCE1-219ENST00000583294 SHISA3A0PJX4 238 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 MEIS1O00470 390 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 SLC10A6Q3KNW5 377 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 SPATC1Q76KD6 591 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 LRP10Q7Z4F1 713 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 LGR4Q9BXB1 951 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 GBP3Q9H0R5 595 aa8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 ZC3H7BQ9UGR2 993 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-219ENST00000583294 WASH4PA8MWX3 477 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 H3BS24 57 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 PPM1BO75688 479 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 CEACAM5P06731 702 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 NAT2P11245 290 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 ITGA4P13612 1032 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 ZNF445P59923 1031 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 CPSF6Q16630 551 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 MSMPQ1L6U9 139 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 CLEC16AQ2KHT3 1053 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 NOP9Q86U38 636 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 PIWIL2Q8TC59 973 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 HSPA12BQ96MM6 686 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
SMARCE1-219ENST00000583294 DIAPH1O60610 1272 aaKnown RBP8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 PRAMEF1O95521 474 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 PPP2R5DQ14738 602 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 ST13P5Q8NFI4 369 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 DUSP15Q9H1R2 295 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 NOL6Q9H6R4 1146 aaKnown RBP8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 MKNK2Q9HBH9 465 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 WHRNQ9P202 907 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 ST14Q9Y5Y6 855 aa8.38□□□□□ -1.07
SMARCE1-219ENST00000583294 ZNF143P52747 638 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-219ENST00000583294 SSRP1Q08945 709 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-219ENST00000583294 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
SMARCE1-219ENST00000583294 CHST7Q9NS84 486 aa8.37□□□□□ -1.07
SMARCE1-219ENST00000583294 ZMYM5Q9UJ78 669 aa8.37□□□□□ -1.07
SMARCE1-219ENST00000583294 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 PAX4O43316 350 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 SIGLEC6O43699 453 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms