RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
GGA3-213ENST00000582486 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 TMOD2Q9NZR1 351 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
GGA3-213ENST00000582486 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
GGA3-213ENST00000582486 WWC2Q6AWC2 1192 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
GGA3-213ENST00000582486 METTL16Q86W50 562 aaKnown RBP12.87□□□□□ -0.35
GGA3-213ENST00000582486 FMR1NBQ8N0W7 255 aaPredicted RBP12.87□□□□□ -0.35
GGA3-213ENST00000582486 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 VAT1LQ9HCJ6 419 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
GGA3-213ENST00000582486 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
GGA3-213ENST00000582486 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
GGA3-213ENST00000582486 CMA1P23946 247 aa12.86□□□□□ -0.35
GGA3-213ENST00000582486 HEATR3Q7Z4Q2 680 aa12.86□□□□□ -0.35
GGA3-213ENST00000582486 CLIC6Q96NY7 704 aa12.86□□□□□ -0.35
GGA3-213ENST00000582486 CCDC192P0DO97 292 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 GDF11O95390 407 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 CALML3P27482 149 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 VEZTQ9HBM0 779 aa12.85□□□□□ -0.35
GGA3-213ENST00000582486 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
GGA3-213ENST00000582486 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 STXBP3O00186 592 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 WNT7AO00755 349 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 EEF2P13639 858 aaKnown RBP12.84□□□□□ -0.35
GGA3-213ENST00000582486 PFKFB1P16118 471 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 RASSF7Q02833 373 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 SEPT2Q15019 361 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 ASPRV1Q53RT3 343 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 KRI1Q8N9T8 703 aaKnown RBP12.84□□□□□ -0.35
GGA3-213ENST00000582486 MTMR14Q8NCE2 650 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
GGA3-213ENST00000582486 PIGSQ96S52 555 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 PCDHA4Q9UN74 947 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
GGA3-213ENST00000582486 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 CUTAO60888 179 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 TYRO3Q06418 890 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 RRP1BQ14684 758 aaKnown RBP12.84□□□□□ -0.35
GGA3-213ENST00000582486 ABCB5Q2M3G0 1257 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 CEP131Q9UPN4 1083 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 MRVI1Q9Y6F6 885 aa12.84□□□□□ -0.35
GGA3-213ENST00000582486 COL2A1P02458 1487 aaPredicted RBP12.84□□□□□ -0.35
GGA3-213ENST00000582486 CNTNAP1P78357 1384 aa12.83□□□□□ -0.35
GGA3-213ENST00000582486 WNT10BO00744 389 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 CTAGE5O15320 804 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 ZNF202O95125 648 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 PRELPP51888 382 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 JAG1P78504 1218 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 GRIN1Q05586 938 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 TNIP1Q15025 636 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 TMEM179Q6ZVK1 233 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 SIAH1Q8IUQ4 282 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 RASGRP4Q8TDF6 673 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 ANP32BQ92688 251 aaKnown RBP12.83□□□□□ -0.36
GGA3-213ENST00000582486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.36
GGA3-213ENST00000582486 NYAP2Q9P242 653 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
GGA3-213ENST00000582486 FBXO2Q9UK22 296 aaPredicted RBP12.83□□□□□ -0.36
GGA3-213ENST00000582486 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
GGA3-213ENST00000582486 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 RAD21O60216 631 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 PTPREP23469 700 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 ZNF174Q15697 407 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 RESP18Q5W5W9 173 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 MKL1Q969V6 931 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 ZBED3Q96IU2 234 aaPredicted RBP12.83□□□□□ -0.36
GGA3-213ENST00000582486 SDF4Q9BRK5 362 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 TMEM39BQ9GZU3 492 aa12.83□□□□□ -0.36
GGA3-213ENST00000582486 MYOZ2Q9NPC6 264 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms