RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-212ENST00000582122 NDUFB10O96000 172 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 CYP21A2P08686 494 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 BMP3P12645 472 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 DSG3P32926 999 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 SLC1A4P43007 532 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 PSMC4P43686 418 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 ERVK-24P63145 666 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 SLFN13Q68D06 897 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 OTOP1Q7RTM1 612 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 CLEC10AQ8IUN9 316 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 SPICE1Q8N0Z3 855 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 PRPF38AQ8NAV1 312 aaKnown RBP12.25□□□□□ -0.45
TOP3A-212ENST00000582122 CD99L2Q8TCZ2 262 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 DCAF4Q8WV16 495 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-212ENST00000582122 SLF1Q9BQI6 1058 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 ZSWIM5Q9P217 1185 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 PNMA2Q9UL42 364 aa12.25□□□□□ -0.45
TOP3A-212ENST00000582122 CTDP1Q9Y5B0 961 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-212ENST00000582122 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-212ENST00000582122 B4E1Z4 1266 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 E7EWF7 191 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
TOP3A-212ENST00000582122 NEDD4P46934 1319 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 NECTIN1Q15223 517 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 FAM83BQ5T0W9 1011 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 SHCBP1Q8NEM2 672 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 CWC22Q9HCG8 908 aaKnown RBP12.24□□□□□ -0.45
TOP3A-212ENST00000582122 INCENPQ9NQS7 918 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 PPP1R9AQ9ULJ8 1098 aa12.24□□□□□ -0.45
TOP3A-212ENST00000582122 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 STRNO43815 780 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 ZBED4O75132 1171 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 SLC25A27O95847 323 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 HMGB1P09429 215 aaKnown RBP12.23□□□□□ -0.45
TOP3A-212ENST00000582122 MCCP23508 829 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 MCM5P33992 734 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 STAT2P52630 851 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 TSGA10IPQ3SY00 556 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
TOP3A-212ENST00000582122 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
TOP3A-212ENST00000582122 CREB3L3Q68CJ9 461 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
TOP3A-212ENST00000582122 SOCS4Q8WXH5 440 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 RBPJLQ9UBG7 517 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 SRRDQ9UH36 339 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 ADAMTS5Q9UNA0 930 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 PTPN22Q9Y2R2 807 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 TACC3Q9Y6A5 838 aa12.23□□□□□ -0.45
TOP3A-212ENST00000582122 SLC27A2O14975 620 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 OAZ1P54368 228 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 IKQ13123 557 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-212ENST00000582122 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
TOP3A-212ENST00000582122 KIAA1755Q5JYT7 1200 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
TOP3A-212ENST00000582122 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 TRIM47Q96LD4 638 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 MROH8Q9H579 483 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
TOP3A-212ENST00000582122 IVNS1ABPQ9Y6Y0 642 aa12.22□□□□□ -0.45
TOP3A-212ENST00000582122 MKI67P46013 3256 aaKnown RBP12.22□□□□□ -0.45
TOP3A-212ENST00000582122 TNKSO95271 1327 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 VWA5AO00534 786 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
TOP3A-212ENST00000582122 NMT2O60551 498 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 IRF5Q13568 498 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 ASPRV1Q53RT3 343 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 PLEKHH3Q7Z736 793 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-212ENST00000582122 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 RAET1EQ8TD07 263 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 SPATC1LQ9H0A9 340 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 SLC5A4Q9NY91 659 aa12.21□□□□□ -0.45
TOP3A-212ENST00000582122 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 PDHBP11177 359 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 CAPN2P17655 700 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 PSMA5P28066 241 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 WTAPQ15007 396 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 CCDC96Q2M329 555 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 BTNL9Q6UXG8 535 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 RIOX2Q8IUF8 465 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 ABRAQ8N0Z2 381 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 ATG4CQ96DT6 458 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 TEX13BQ9BXU2 312 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 FBXO40Q9UH90 709 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms