RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SH3D19Q5HYK7 790 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 USP17L2Q6R6M4 530 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 PROCA1Q8NCQ7 364 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 CEP95Q96GE4 821 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 TCP11L1Q9NUJ3 509 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 NYAP2Q9P242 653 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 UNC80Q8N2C7 3258 aa15.83■□□□□ 0.12
CSNK1D-220ENST00000581737 B4E1Z4 1266 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 KDM4AO75164 1064 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 FARP2O94887 1054 aaPredicted RBP15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 EEF2P13639 858 aaKnown RBP15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 ELNP15502 786 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 HSPA4P34932 840 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 GADL1Q6ZQY3 521 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 NKX2-3Q8TAU0 364 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 UBAC1Q9BSL1 405 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 GOPCQ9HD26 462 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 BIN2Q9UBW5 565 aaPredicted RBP15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 TMX2Q9Y320 296 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 TACC3Q9Y6A5 838 aa15.82■□□□□ 0.12
CSNK1D-220ENST00000581737 K7ELQ4 463 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 SGPL1O95470 568 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 HOXD10P28358 340 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 HMGCS2P54868 508 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 SART3Q15020 963 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 TSGA10IPQ3SY00 556 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 CLEC10AQ8IUN9 316 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 ACER1Q8TDN7 264 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 LPAR1Q92633 364 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 C12orf42Q96LP6 360 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 HTATIP2Q9BUP3 242 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
CSNK1D-220ENST00000581737 STOX1Q6ZVD7 989 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 KCNB2Q92953 911 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 MKL1Q969V6 931 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 IL17RAQ96F46 866 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 TTC14Q96N46 770 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 VCPKMTQ9H867 229 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 CLIP2Q9UDT6 1046 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 AGTPBP1Q9UPW5 1226 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 SLC45A1Q9Y2W3 748 aa15.8■□□□□ 0.12
CSNK1D-220ENST00000581737 A0A1W2PRG0 241 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 ERICH2A1L162 156 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 ADCY3O60266 1144 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 INHAP05111 366 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 FLT3LGP49771 235 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 FCGRTP55899 365 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 UBXN2AP68543 259 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 ZYXQ15942 572 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 SIAH1Q8IUQ4 282 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 SLAIN1Q8ND83 568 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 DIS3LQ8TF46 1054 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 DEFB118Q96PH6 123 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 ZSCAN10Q96SZ4 725 aaPredicted RBP15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 PARK7Q99497 189 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 MTA3Q9BTC8 594 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 ZSWIM5Q9P217 1185 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 PNMA3Q9UL41 463 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 TAF6LQ9Y6J9 622 aa15.79■□□□□ 0.12
CSNK1D-220ENST00000581737 VCANP13611 3396 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 TOP1P11387 765 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 PSMA5P28066 241 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 MCM5P33992 734 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 NOVP48745 357 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 DGKHQ86XP1 1220 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 MB21D2Q8IYB1 491 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 GMCL1P1Q8NEA9 526 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 NEK1Q96PY6 1258 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 EMILIN3Q9NT22 766 aa15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 CIZ1Q9ULV3 898 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-220ENST00000581737 TNKSO95271 1327 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 WDR19Q8NEZ3 1342 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 WDR46O15213 610 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 NMT2O60551 498 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 VCAM1P19320 739 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 LRRC47Q8N1G4 583 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 KIF2CQ99661 725 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 SNX14Q9Y5W7 946 aa15.77■□□□□ 0.12
CSNK1D-220ENST00000581737 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 F5H6K3 240 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 IFIT3O14879 490 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 PRC1O43663 620 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 RAD21O60216 631 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 EVI5O60447 810 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms