RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 MYH4Q9Y623 1939 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 GNRH1P01148 92 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 APPP05067 770 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 ZFYP08048 801 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-211ENST00000581536 HOXD10P28358 340 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 FLT3LGP49771 235 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 FCGRTP55899 365 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 HERVK_113P62684 666 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-211ENST00000581536 SBK1Q52WX2 424 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 CATSPERGQ6ZRH7 1159 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 RAET1EQ8TD07 263 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 FEZ1Q99689 392 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 INCENPQ9NQS7 918 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 SWAP70Q9UH65 585 aa11.63□□□□□ -0.55
TOP3A-211ENST00000581536 COL11A1P12107 1806 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-211ENST00000581536 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
TOP3A-211ENST00000581536 CNMDO75829 334 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 ELNP15502 786 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-211ENST00000581536 NUCB1Q02818 461 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 AAMPQ13685 434 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 FAM110CQ1W6H9 321 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 CHD1LQ86WJ1 897 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 PLEKHM2Q8IWE5 1019 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 C12orf42Q96LP6 360 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.62□□□□□ -0.55
TOP3A-211ENST00000581536 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 KRTAP3-2Q9BYR7 98 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 KIAA1683Q9H0B3 1180 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 RPAP3Q9H6T3 665 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-211ENST00000581536 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
TOP3A-211ENST00000581536 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
TOP3A-211ENST00000581536 PARP14Q460N5 1801 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 FOXP2O15409 715 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
TOP3A-211ENST00000581536 VCAM1P19320 739 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 GRK4P32298 578 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 PSEN2P49810 448 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 PRMT2P55345 433 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 USP17L24Q0WX57 530 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 TMEM179Q6ZVK1 233 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 EVI5LQ96CN4 794 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 FAM227BQ96M60 508 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 PAGR1Q9BTK6 254 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
TOP3A-211ENST00000581536 TRIM6-TRIM34B2RNG4 842 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 ADCY3O60266 1144 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 PRDM1O75626 825 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 RASA1P20936 1047 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 TDO2P48775 406 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 USP14P54578 494 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
TOP3A-211ENST00000581536 ATP2B2Q01814 1243 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 GIMAP6Q6P9H5 292 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 AMOTL1Q8IY63 956 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 SPICE1Q8N0Z3 855 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 GPRC5AQ8NFJ5 357 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 RILPL2Q969X0 211 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 COA7Q96BR5 231 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 CCDC17Q96LX7 622 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 PORCNQ9H237 461 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 MKNK2Q9HBH9 465 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 ARPP21Q9UBL0 812 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-211ENST00000581536 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-211ENST00000581536 TACC3Q9Y6A5 838 aa11.6□□□□□ -0.55
TOP3A-211ENST00000581536 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-211ENST00000581536 GNAT2P19087 354 aa11.59□□□□□ -0.55
TOP3A-211ENST00000581536 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
TOP3A-211ENST00000581536 ERVK-24P63145 666 aa11.59□□□□□ -0.55
TOP3A-211ENST00000581536 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
TOP3A-211ENST00000581536 TRIM32Q13049 653 aa11.59□□□□□ -0.55
TOP3A-211ENST00000581536 TSR1Q2NL82 804 aaKnown RBP11.59□□□□□ -0.55
TOP3A-211ENST00000581536 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
TOP3A-211ENST00000581536 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 CCL5P13501 91 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 CYP2B6P20813 491 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 ICA1Q05084 483 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-211ENST00000581536 IRF5Q13568 498 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 COG2Q14746 738 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
TOP3A-211ENST00000581536 FAM47AQ5JRC9 791 aa11.58□□□□□ -0.56
TOP3A-211ENST00000581536 ZNF444Q8N0Y2 327 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-211ENST00000581536 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms