RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
GAPLINC-203ENST00000581029 TRPM7Q96QT4 1865 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 SSC5DA1L4H1 1573 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 KLRF2D3W0D1 207 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 FMNL1O95466 1100 aaPredicted RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 ZBTB48P10074 688 aaPredicted RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 STAT2P52630 851 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 BTNL9Q6UXG8 535 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 LRRC47Q8N1G4 583 aaKnown RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 ZKSCAN4Q969J2 545 aaPredicted RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 ZNF408Q9H9D4 720 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 FEM1BQ9UK73 627 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 ATP6V1DQ9Y5K8 247 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 MYPNQ86TC9 1320 aa10.58□□□□□ -0.72
GAPLINC-203ENST00000581029 PTPDC1A2A3K4 754 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 KIF3CO14782 793 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 RAD21O60216 631 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 NDUFB10O96000 172 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 SPP2Q13103 211 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 PRKG1Q13976 671 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 RRP1BQ14684 758 aaKnown RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 NTRK3Q16288 839 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 LARP1BQ659C4 914 aaKnown RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 SIAH1Q8IUQ4 282 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 NSUN7Q8NE18 718 aaKnown RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 CCDC148Q8NFR7 591 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 GTF3C2Q8WUA4 911 aaPredicted RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 MAF1Q9H063 256 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 BRMS1Q9HCU9 246 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 SH3GLB2Q9NR46 395 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 ORC3Q9UBD5 711 aaPredicted RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 MAD2L2Q9UI95 211 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 ISY1Q9ULR0 285 aaKnown RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 CTDP1Q9Y5B0 961 aaPredicted RBP10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 SNCAIPQ9Y6H5 919 aa10.57□□□□□ -0.72
GAPLINC-203ENST00000581029 H3BQV1 296 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 LARGE1O95461 756 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 GJB2P29033 226 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 CDC27P30260 824 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 GTF2A2P52657 109 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 INHBEP58166 350 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 IKQ13123 557 aaPredicted RBP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 SNAPC2Q13487 334 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 IFFO2Q5TF58 517 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 MCTP2Q6DN12 878 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 GALNT17Q6IS24 598 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 SLC26A6Q9BXS9 759 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 HOXC10Q9NYD6 342 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 CHMP5Q9NZZ3 219 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 KCNH4Q9UQ05 1017 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 WDR33Q9C0J8 1336 aaKnown RBP10.56□□□□□ -0.72
GAPLINC-203ENST00000581029 PNMA6FA0A0J9YX94 578 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 TMEM88BA6NKF7 163 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 TMEM232C9JQI7 657 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 UBE2Q2LH0YL09 131 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 TRAF5O00463 557 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 CETPP11597 493 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 RXRAP19793 462 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 OSBPP22059 807 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 CALML3P27482 149 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 ECE1P42892 770 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 MTMR2Q13614 643 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
GAPLINC-203ENST00000581029 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms