RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 ALX1Q15699 326 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 SHCBP1Q8NEM2 672 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 NEDD1Q8NHV4 660 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 MKL1Q969V6 931 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 CEP95Q96GE4 821 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 NAPBQ9H115 298 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 MKNK2Q9HBH9 465 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 LAMA2P24043 3122 aaKnown RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 F5H6K3 240 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 FARP2O94887 1054 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 NDUFB10O96000 172 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 FGRP09769 529 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 CAPN2P17655 700 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 ERCC3P19447 782 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 KLRC3Q07444 240 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 CACNB2Q08289 660 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 TMEM132BQ14DG7 1078 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 FAM83BQ5T0W9 1011 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 MTMR4Q9NYA4 1195 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZNF214Q9UL59 606 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 SYNPO2Q9UMS6 1093 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
SUPT4H1-204ENST00000580947 NOVP48745 357 aa12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 MCMDC2Q4G0Z9 681 aa12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 LHX8Q68G74 356 aa12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 INCENPQ9NQS7 918 aa12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 OGDHLQ9ULD0 1010 aa12.61□□□□□ -0.39
SUPT4H1-204ENST00000580947 MYH6P13533 1939 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 VWA5AO00534 786 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 COBLO75128 1261 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 FGAP02671 866 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 PDE4AP27815 886 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 ADORA2AP29274 412 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 CCND3P30281 292 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 PDE4BQ07343 736 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 FAM47AQ5JRC9 791 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZNF444Q8N0Y2 327 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 ABRAQ8N0Z2 381 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 MROH8Q9H579 483 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 IL17RBQ9NRM6 502 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 CLIP2Q9UDT6 1046 aa12.6□□□□□ -0.39
SUPT4H1-204ENST00000580947 H0YGN5 161 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 STRNO43815 780 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 ORC4O43929 436 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 TTLL1O95922 423 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 HSPD1P10809 573 aaKnown RBP12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 SDSP20132 328 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 TFAP4Q01664 338 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 WDR78Q5VTH9 848 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 TRPV1Q8NER1 839 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 PAWRQ96IZ0 340 aaKnown RBP12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 IVNS1ABPQ9Y6Y0 642 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 LRRC37A2A6NM11 1700 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
SUPT4H1-204ENST00000580947 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 NMT2O60551 498 aa12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 SLC3A2P08195 630 aaKnown RBP12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
SUPT4H1-204ENST00000580947 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 SLC25A27O95847 323 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 COL6A1P12109 1028 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 CYBAP13498 195 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 CYP2C19P33261 490 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 STAT3P40763 770 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 PLS1Q14651 629 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 NCAPG2Q86XI2 1143 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 IL25Q9H293 177 aa12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
SUPT4H1-204ENST00000580947 RIPK3Q9Y572 518 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms