RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 HAND2P61296 217 aa31.84■■■□□ 2.69
LINC00271-207ENST00000580741 PLS1Q14651 629 aa31.84■■■□□ 2.69
LINC00271-207ENST00000580741 TTC22Q5TAA0 569 aa31.84■■■□□ 2.69
LINC00271-207ENST00000580741 USP6NLQ92738 828 aa31.84■■■□□ 2.69
LINC00271-207ENST00000580741 SPATC1LQ9H0A9 340 aa31.84■■■□□ 2.69
LINC00271-207ENST00000580741 GJB1P08034 283 aa31.83■■■□□ 2.69
LINC00271-207ENST00000580741 MB21D1Q8N884 522 aa31.83■■■□□ 2.69
LINC00271-207ENST00000580741 TSPY2A6NKD2 308 aa31.82■■■□□ 2.68
LINC00271-207ENST00000580741 RANBP6O60518 1105 aaKnown RBP31.82■■■□□ 2.68
LINC00271-207ENST00000580741 PTPREP23469 700 aa31.82■■■□□ 2.68
LINC00271-207ENST00000580741 RGS2P41220 211 aa31.82■■■□□ 2.68
LINC00271-207ENST00000580741 MKL1Q969V6 931 aa31.82■■■□□ 2.68
LINC00271-207ENST00000580741 PPP1R9AQ9ULJ8 1098 aa31.82■■■□□ 2.68
LINC00271-207ENST00000580741 ZMYM6O95789 1325 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 MYH4Q9Y623 1939 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 HIP1O00291 1037 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 NMT2O60551 498 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 MFAP1P55081 439 aaKnown RBP31.81■■■□□ 2.68
LINC00271-207ENST00000580741 CCL14Q16627 93 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 TOMM22Q9NS69 142 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 PARP14Q460N5 1801 aa31.81■■■□□ 2.68
LINC00271-207ENST00000580741 XRCC5P13010 732 aaKnown RBP31.8■■■□□ 2.68
LINC00271-207ENST00000580741 GJA8P48165 433 aa31.8■■■□□ 2.68
LINC00271-207ENST00000580741 MAP2K5Q13163 448 aa31.8■■■□□ 2.68
LINC00271-207ENST00000580741 TMEM132BQ14DG7 1078 aa31.8■■■□□ 2.68
LINC00271-207ENST00000580741 RRP12Q5JTH9 1297 aaKnown RBP31.8■■■□□ 2.68
LINC00271-207ENST00000580741 APBA2Q99767 749 aa31.8■■■□□ 2.68
LINC00271-207ENST00000580741 IVNS1ABPQ9Y6Y0 642 aa31.8■■■□□ 2.68
LINC00271-207ENST00000580741 ORC4O43929 436 aa31.79■■■□□ 2.68
LINC00271-207ENST00000580741 ZKSCAN1P17029 563 aaPredicted RBP31.79■■■□□ 2.68
LINC00271-207ENST00000580741 ERCC3P19447 782 aa31.79■■■□□ 2.68
LINC00271-207ENST00000580741 U2AF1L4Q8WU68 220 aaKnown RBP31.79■■■□□ 2.68
LINC00271-207ENST00000580741 CHMP4CQ96CF2 233 aa31.79■■■□□ 2.68
LINC00271-207ENST00000580741 NBPF3Q9H094 633 aa31.79■■■□□ 2.68
LINC00271-207ENST00000580741 IL17RBQ9NRM6 502 aa31.79■■■□□ 2.68
LINC00271-207ENST00000580741 SLC15A5A6NIM6 579 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 GRB14Q14449 540 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 NCAPG2Q86XI2 1143 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 NKX2-3Q8TAU0 364 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 DEFB118Q96PH6 123 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 SLF1Q9BQI6 1058 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.78■■■□□ 2.68
LINC00271-207ENST00000580741 IL25Q9H293 177 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 ADAMTS5Q9UNA0 930 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 STX8Q9UNK0 236 aa31.78■■■□□ 2.68
LINC00271-207ENST00000580741 VWA5AO00534 786 aa31.77■■■□□ 2.68
LINC00271-207ENST00000580741 FGRP09769 529 aa31.77■■■□□ 2.68
LINC00271-207ENST00000580741 SLFN13Q68D06 897 aa31.77■■■□□ 2.68
LINC00271-207ENST00000580741 TBC1D10CQ8IV04 446 aa31.77■■■□□ 2.68
LINC00271-207ENST00000580741 SHCBP1Q8NEM2 672 aa31.77■■■□□ 2.68
LINC00271-207ENST00000580741 PAK6Q9NQU5 681 aaPredicted RBP31.77■■■□□ 2.68
LINC00271-207ENST00000580741 GMCL1P1Q8NEA9 526 aa31.76■■■□□ 2.67
LINC00271-207ENST00000580741 SYNPO2Q9UMS6 1093 aa31.76■■■□□ 2.67
LINC00271-207ENST00000580741 SGPL1O95470 568 aa31.75■■■□□ 2.67
LINC00271-207ENST00000580741 PRKAR2AP13861 404 aaKnown RBP31.75■■■□□ 2.67
LINC00271-207ENST00000580741 REPS2Q8NFH8 660 aa31.75■■■□□ 2.67
LINC00271-207ENST00000580741 FLRT1Q9NZU1 646 aa31.75■■■□□ 2.67
LINC00271-207ENST00000580741 ISY1Q9ULR0 285 aaKnown RBP31.75■■■□□ 2.67
LINC00271-207ENST00000580741 NPLOC4Q8TAT6 608 aa31.74■■■□□ 2.67
LINC00271-207ENST00000580741 KIFC2Q96AC6 838 aa31.74■■■□□ 2.67
LINC00271-207ENST00000580741 COL11A1P12107 1806 aaPredicted RBP31.74■■■□□ 2.67
LINC00271-207ENST00000580741 ADORA2AP29274 412 aa31.73■■■□□ 2.67
LINC00271-207ENST00000580741 AKNAD1Q5T1N1 836 aa31.73■■■□□ 2.67
LINC00271-207ENST00000580741 MAP3K21Q5TCX8 1036 aa31.73■■■□□ 2.67
LINC00271-207ENST00000580741 RASGRP2Q7LDG7 609 aa31.73■■■□□ 2.67
LINC00271-207ENST00000580741 TRMT44Q8IYL2 757 aaKnown RBP31.73■■■□□ 2.67
LINC00271-207ENST00000580741 MROH8Q9H579 483 aa31.73■■■□□ 2.67
LINC00271-207ENST00000580741 HMX1Q9NP08 348 aaPredicted RBP31.73■■■□□ 2.67
LINC00271-207ENST00000580741 ZNF214Q9UL59 606 aaPredicted RBP31.73■■■□□ 2.67
LINC00271-207ENST00000580741 RPTORQ8N122 1335 aa31.73■■■□□ 2.67
LINC00271-207ENST00000580741 BMP3P12645 472 aa31.72■■■□□ 2.67
LINC00271-207ENST00000580741 CACNB2Q08289 660 aaPredicted RBP31.72■■■□□ 2.67
LINC00271-207ENST00000580741 MFSD6Q6ZSS7 791 aa31.72■■■□□ 2.67
LINC00271-207ENST00000580741 STAG1Q8WVM7 1258 aa31.72■■■□□ 2.67
LINC00271-207ENST00000580741 MTMR7Q9Y216 660 aa31.72■■■□□ 2.67
LINC00271-207ENST00000580741 ZNF213O14771 459 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 TFRCP02786 760 aaKnown RBP31.71■■■□□ 2.67
LINC00271-207ENST00000580741 STAT3P40763 770 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 PPP4R3BQ5MIZ7 849 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 DPP9Q86TI2 863 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 RIOX2Q8IUF8 465 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 PRPF38AQ8NAV1 312 aaKnown RBP31.71■■■□□ 2.67
LINC00271-207ENST00000580741 DSCC1Q9BVC3 393 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 FEM1BQ9UK73 627 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 NEDD4P46934 1319 aa31.71■■■□□ 2.67
LINC00271-207ENST00000580741 SLC25A27O95847 323 aa31.7■■■□□ 2.67
LINC00271-207ENST00000580741 HOXC6P09630 235 aa31.7■■■□□ 2.67
LINC00271-207ENST00000580741 MCCP23508 829 aa31.7■■■□□ 2.67
LINC00271-207ENST00000580741 TMEM232C9JQI7 657 aa31.69■■■□□ 2.66
LINC00271-207ENST00000580741 STRNO43815 780 aa31.69■■■□□ 2.66
LINC00271-207ENST00000580741 COBLO75128 1261 aa31.69■■■□□ 2.66
LINC00271-207ENST00000580741 SLC1A4P43007 532 aa31.69■■■□□ 2.66
LINC00271-207ENST00000580741 SKAP1Q86WV1 359 aa31.69■■■□□ 2.66
LINC00271-207ENST00000580741 GMCL1Q96IK5 515 aa31.69■■■□□ 2.66
LINC00271-207ENST00000580741 CHMLP26374 656 aa31.68■■■□□ 2.66
LINC00271-207ENST00000580741 CCND3P30281 292 aaPredicted RBP31.68■■■□□ 2.66
LINC00271-207ENST00000580741 NOVP48745 357 aa31.68■■■□□ 2.66
LINC00271-207ENST00000580741 SLC4A3P48751 1232 aa31.68■■■□□ 2.66
LINC00271-207ENST00000580741 CPXCR1Q8N123 301 aa31.68■■■□□ 2.66
LINC00271-207ENST00000580741 CRISPLD2Q9H0B8 497 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms