RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PDE6AP16499 860 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 DNAJB2P25686 324 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 AACSQ86V21 672 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 MMP19Q99542 508 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 TINF2Q9BSI4 451 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 VCPKMTQ9H867 229 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 TMEM39AQ9NV64 488 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 TMX2Q9Y320 296 aa23.17■■□□□ 1.3
NDEL1-209ENST00000580738 SLC25A27O95847 323 aa23.16■■□□□ 1.3
NDEL1-209ENST00000580738 FAAP100Q0VG06 881 aa23.16■■□□□ 1.3
NDEL1-209ENST00000580738 LCORLQ8N3X6 602 aa23.16■■□□□ 1.3
NDEL1-209ENST00000580738 FBXO28Q9NVF7 368 aa23.16■■□□□ 1.3
NDEL1-209ENST00000580738 NAV1Q8NEY1 1877 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ZNF532Q9HCE3 1301 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.15■■□□□ 1.3
NDEL1-209ENST00000580738 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.15■■□□□ 1.3
NDEL1-209ENST00000580738 SMIM22K7EJ46 135 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ZNF865P0CJ78 1059 aaPredicted RBP23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ICA1Q05084 483 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 TJAP1Q5JTD0 557 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ZNF576Q9H609 170 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ARHGEF10LQ9HCE6 1279 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ADAMTS5Q9UNA0 930 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 EXOC6BQ9Y2D4 811 aa23.15■■□□□ 1.3
NDEL1-209ENST00000580738 ADAMTS4O75173 837 aa23.14■■□□□ 1.29
NDEL1-209ENST00000580738 ANKRD33Q7Z3H0 272 aa23.14■■□□□ 1.29
NDEL1-209ENST00000580738 SWAP70Q9UH65 585 aa23.14■■□□□ 1.29
NDEL1-209ENST00000580738 TCRBV5S4A2TA0A5A2 114 aa23.13■■□□□ 1.29
NDEL1-209ENST00000580738 WDR46O15213 610 aaKnown RBP23.13■■□□□ 1.29
NDEL1-209ENST00000580738 KCTD2Q14681 263 aa23.13■■□□□ 1.29
NDEL1-209ENST00000580738 TTF1Q15361 905 aaPredicted RBP23.13■■□□□ 1.29
NDEL1-209ENST00000580738 RIOX2Q8IUF8 465 aa23.13■■□□□ 1.29
NDEL1-209ENST00000580738 TNFRSF10AO00220 468 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 PRKAB2O43741 272 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 AKR1A1P14550 325 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 ACLYP53396 1101 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 ITPRIPQ8IWB1 547 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 TOX2Q96NM4 488 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.12■■□□□ 1.29
NDEL1-209ENST00000580738 SH2D4AQ9H788 454 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 ARMT1Q9H993 441 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 IL1RAPL2Q9NP60 686 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 DIS3Q9Y2L1 958 aaKnown RBP23.12■■□□□ 1.29
NDEL1-209ENST00000580738 ROBO3Q96MS0 1386 aa23.12■■□□□ 1.29
NDEL1-209ENST00000580738 ZNFX1Q9P2E3 1918 aaKnown RBP23.12■■□□□ 1.29
NDEL1-209ENST00000580738 CYP2D7A0A087X1C5 515 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 DCDC2CA8MYV0 355 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 VWA5AO00534 786 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 RLBP1P12271 317 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 COL9A1P20849 921 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 STAT3P40763 770 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 SLFNL1Q499Z3 407 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 CEP85Q6P2H3 762 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 TIFAQ96CG3 184 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 TSEN34Q9BSV6 310 aaKnown RBP23.11■■□□□ 1.29
NDEL1-209ENST00000580738 STARD7Q9NQZ5 370 aa23.11■■□□□ 1.29
NDEL1-209ENST00000580738 SYNRGQ9UMZ2 1314 aa23.1■■□□□ 1.29
NDEL1-209ENST00000580738 GOLIM4O00461 696 aa23.1■■□□□ 1.29
NDEL1-209ENST00000580738 TIMP1P01033 207 aa23.1■■□□□ 1.29
NDEL1-209ENST00000580738 EEF2P13639 858 aaKnown RBP23.1■■□□□ 1.29
NDEL1-209ENST00000580738 C16orf59Q7L2K0 433 aa23.1■■□□□ 1.29
NDEL1-209ENST00000580738 PPM1EQ8WY54 764 aa23.1■■□□□ 1.29
NDEL1-209ENST00000580738 ZNF214Q9UL59 606 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-209ENST00000580738 CNPY2Q9Y2B0 182 aa23.1■■□□□ 1.29
NDEL1-209ENST00000580738 GRXCR1A8MXD5 290 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 PBX2P40425 430 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 CDK8P49336 464 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 KCNA10Q16322 511 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 CCSAPQ6IQ19 270 aaPredicted RBP23.09■■□□□ 1.29
NDEL1-209ENST00000580738 ERC1Q8IUD2 1116 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
NDEL1-209ENST00000580738 KLHDC9Q8NEP7 349 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 REPS2Q8NFH8 660 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 NUP133Q8WUM0 1156 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 DNAJC2Q99543 621 aaKnown RBP23.09■■□□□ 1.29
NDEL1-209ENST00000580738 TBX21Q9UL17 535 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 PPP1R9AQ9ULJ8 1098 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 PARP14Q460N5 1801 aa23.09■■□□□ 1.29
NDEL1-209ENST00000580738 MYADML2A6NDP7 307 aa23.08■■□□□ 1.29
NDEL1-209ENST00000580738 SNAI1O95863 264 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-209ENST00000580738 IRX5P78411 483 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-209ENST00000580738 CCDC17Q96LX7 622 aa23.08■■□□□ 1.29
NDEL1-209ENST00000580738 RAPGEFL1Q9UHV5 662 aa23.08■■□□□ 1.29
NDEL1-209ENST00000580738 COL11A1P12107 1806 aaPredicted RBP23.08■■□□□ 1.28
NDEL1-209ENST00000580738 CHD9Q3L8U1 2897 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 TMEM240Q5SV17 173 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 FAM83BQ5T0W9 1011 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 C12orf60Q5U649 245 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 MFSD5Q6N075 450 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 RHPN1Q8TCX5 695 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 PBX4Q9BYU1 374 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 FAM184BQ9ULE4 1060 aa23.07■■□□□ 1.28
NDEL1-209ENST00000580738 MOXD2PA6NHM9 499 aa23.06■■□□□ 1.28
NDEL1-209ENST00000580738 RAD21O60216 631 aa23.06■■□□□ 1.28
NDEL1-209ENST00000580738 MBD4O95243 580 aa23.06■■□□□ 1.28
NDEL1-209ENST00000580738 PRDM12Q9H4Q4 367 aa23.06■■□□□ 1.28
NDEL1-209ENST00000580738 ATP8A2Q9NTI2 1148 aa23.06■■□□□ 1.28
NDEL1-209ENST00000580738 PLXNA1Q9UIW2 1896 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms