RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 DIS3Q9Y2L1 958 aaKnown RBP17.33■□□□□ 0.36
SMARCE1-216ENST00000580419 IGKV6D-41A0A0C4DH26 115 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 ATP2A1O14983 1001 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 ERCC3P19447 782 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 ADORA2AP29274 412 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 ZMYM1Q5SVZ6 1142 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 RIOX2Q8IUF8 465 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 MKNK2Q9HBH9 465 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 PPP1R9AQ9ULJ8 1098 aa17.32■□□□□ 0.36
SMARCE1-216ENST00000580419 FDX1P10109 184 aa17.31■□□□□ 0.36
SMARCE1-216ENST00000580419 DPP9Q86TI2 863 aa17.31■□□□□ 0.36
SMARCE1-216ENST00000580419 IFNL3Q8IZI9 196 aa17.31■□□□□ 0.36
SMARCE1-216ENST00000580419 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
SMARCE1-216ENST00000580419 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
SMARCE1-216ENST00000580419 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 VWA5AO00534 786 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 FCER1AP12319 257 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 CYBAP13498 195 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 MSL3Q8N5Y2 521 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 NPLOC4Q8TAT6 608 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 FLRT1Q9NZU1 646 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 RBM27Q9P2N5 1060 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 ZNF214Q9UL59 606 aaPredicted RBP17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 PLXNA1Q9UIW2 1896 aa17.3■□□□□ 0.36
SMARCE1-216ENST00000580419 PFASO15067 1338 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 TDO2P48775 406 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 PDE4BQ07343 736 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 TMEM132BQ14DG7 1078 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 WDR78Q5VTH9 848 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 ZNF444Q8N0Y2 327 aaPredicted RBP17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 REPS2Q8NFH8 660 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 GDF15Q99988 308 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 MTMR4Q9NYA4 1195 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
SMARCE1-216ENST00000580419 F5H6K3 240 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 M0R2C6 588 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 DNM1LO00429 736 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 SEPT4O43236 478 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 STAT3P40763 770 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 OAZ1P54368 228 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 KLRC3Q07444 240 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 ALX1Q15699 326 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 GPR153Q6NV75 609 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 FSD1Q9BTV5 496 aa17.28■□□□□ 0.36
SMARCE1-216ENST00000580419 MINDY4BA8MYZ0 360 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 PLA2G6O60733 806 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 COBLO75128 1261 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 TTLL1O95922 423 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 NT5C2P49902 561 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 TSHZ3Q63HK5 1081 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 NCAPG2Q86XI2 1143 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 MAML3Q96JK9 1138 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 TEX13BQ9BXU2 312 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
SMARCE1-216ENST00000580419 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 NDUFB10O96000 172 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 APPP05067 770 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 FGRP09769 529 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 PDE1AP54750 535 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 NAPBQ9H115 298 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 HELLSQ9NRZ9 838 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 FEM1BQ9UK73 627 aa17.26■□□□□ 0.35
SMARCE1-216ENST00000580419 CYP2C19P33261 490 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 NOVP48745 357 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 PLS1Q14651 629 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 KCTD2Q14681 263 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 FAM83BQ5T0W9 1011 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 C1orf53Q5VUE5 145 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 ZNF467Q7Z7K2 595 aaPredicted RBP17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 OTUD7AQ8TE49 926 aaPredicted RBP17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 GMCL1Q96IK5 515 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 FBXO28Q9NVF7 368 aa17.25■□□□□ 0.35
SMARCE1-216ENST00000580419 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 PPARAQ07869 468 aa17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 ZNF792Q3KQV3 632 aa17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 MAMDC4Q6UXC1 1216 aa17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 TRPV1Q8NER1 839 aa17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
SMARCE1-216ENST00000580419 MMP19Q99542 508 aa17.24■□□□□ 0.35
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