RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 KTN1Q86UP2 1357 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-216ENST00000580283 DLGAP3O95886 979 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 HNRNPUQ00839 825 aaKnown RBP eCLIP9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■■□□□ 14.3
PPP4R1-216ENST00000580283 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 KCNF1Q9H3M0 494 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 TMEM39AQ9NV64 488 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 SBNO2Q9Y2G9 1366 aa9.1□□□□□ -0.95
PPP4R1-216ENST00000580283 PRPF40AO75400 957 aaKnown RBP9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 BMP3P12645 472 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 FBLN1P23142 703 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 HOMEZQ8IX15 550 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 OSBPL7Q9BZF2 842 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 ARFGEF1Q9Y6D6 1849 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 MEGF6O75095 1541 aa9.09□□□□□ -0.95
PPP4R1-216ENST00000580283 EVC2Q86UK5 1308 aa9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 ITGB7P26010 798 aa9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 FAM20CQ8IXL6 584 aa9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 ZCRB1Q8TBF4 217 aaKnown RBP9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 IP6K1Q92551 441 aa9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 C12orf49Q9H741 205 aa9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
PPP4R1-216ENST00000580283 TIAF1O95411 115 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 ECEL1O95672 775 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 CTSBP07858 339 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 DRD2P14416 443 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 FSTP19883 344 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 USP11P51784 963 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 SOX4Q06945 474 aaPredicted RBP9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 AKAP4Q5JQC9 854 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 ZMYM1Q5SVZ6 1142 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 C3orf58Q8NDZ4 430 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 FAM8A1Q9UBU6 413 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 USP47Q96K76 1375 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 PXDNLA1KZ92 1463 aa9.07□□□□□ -0.96
PPP4R1-216ENST00000580283 CCDC88AQ3V6T2 1871 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 A0A0G2JLW4 131 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 GSC2O15499 205 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 GNA15P30679 374 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 BEND4Q6ZU67 534 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 CLEC10AQ8IUN9 316 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 CEP44Q9C0F1 390 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 PPM1HQ9ULR3 514 aa9.06□□□□□ -0.96
PPP4R1-216ENST00000580283 GSTP1P09211 210 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 ADH5P11766 374 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 KCNA3P22001 575 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 EIF4BP23588 611 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 TPTE2Q6XPS3 522 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 DNAJC14Q6Y2X3 702 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 SLC51AQ86UW1 340 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 YIPF2Q9BWQ6 316 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 C7orf69Q9H7B7 122 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 AP4E1Q9UPM8 1137 aa9.05□□□□□ -0.96
PPP4R1-216ENST00000580283 USP17L7P0C7H9 530 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 ERCC3P19447 782 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 MAP4P27816 1152 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 FSTL1Q12841 308 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 SGO2Q562F6 1265 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 NBPF6Q5VWK0 638 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 ARHGAP27Q6ZUM4 889 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 NPAS4Q8IUM7 802 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 TRIM42Q8IWZ5 723 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 KCNB2Q92953 911 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 NBPF4Q96M43 638 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 DUSP9Q99956 384 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 FAM83CQ9BQN1 747 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 EMILIN2Q9BXX0 1053 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 SAMM50Q9Y512 469 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 TNRC18O15417 2968 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 KCPQ6ZWJ8 1503 aa9.04□□□□□ -0.96
PPP4R1-216ENST00000580283 PALLDQ8WX93 1383 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 HMX2A2RU54 273 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 AOC2O75106 756 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 IGLV1-40P01703 118 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 LIG1P18858 919 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 NME2P22392 152 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 HOXC9P31274 260 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 DYMQ7RTS9 669 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 C2CD4AQ8NCU7 369 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 LINC00116Q8NCU8 138 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 SLC12A5Q9H2X9 1139 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 TNRC6CQ9HCJ0 1690 aaKnown RBP9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 MAP3K19Q56UN5 1328 aa9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 MYH14Q7Z406 1995 aaKnown RBP9.03□□□□□ -0.96
PPP4R1-216ENST00000580283 CYP27B1O15528 508 aa9.02□□□□□ -0.97
PPP4R1-216ENST00000580283 FBXO24O75426 580 aa9.02□□□□□ -0.97
PPP4R1-216ENST00000580283 SLFN14P0C7P3 912 aa9.02□□□□□ -0.97
PPP4R1-216ENST00000580283 HSPA1AP0DMV8 641 aaKnown RBP9.02□□□□□ -0.97
PPP4R1-216ENST00000580283 HSPA1BP0DMV9 641 aaKnown RBP9.02□□□□□ -0.97
PPP4R1-216ENST00000580283 DPEP1P16444 411 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms