RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 HOMER2Q9NSB8 354 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 POLR3KQ9Y2Y1 108 aaPredicted RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 RAD50Q92878 1312 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 PTPRKQ15262 1439 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 NLRP1Q9C000 1473 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 DDAH1O94760 285 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 BAG4O95429 457 aaKnown RBP6.92□□□□□ -1.3
DDX42-210ENST00000579539 APPP05067 770 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 HDAC1Q13547 482 aaPredicted RBP6.92□□□□□ -1.3
DDX42-210ENST00000579539 TERF2Q15554 542 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 PPP2R5EQ16537 467 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 ZSCAN23Q3MJ62 389 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 CEP135Q66GS9 1140 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 THNSL2Q86YJ6 484 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 RAVER1Q8IY67 606 aaKnown RBP6.92□□□□□ -1.3
DDX42-210ENST00000579539 CACTIN-AS1Q8N1I8 211 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 C19orf47Q8N9M1 422 aaKnown RBP6.92□□□□□ -1.3
DDX42-210ENST00000579539 ST13P5Q8NFI4 369 aaPredicted RBP6.92□□□□□ -1.3
DDX42-210ENST00000579539 STK35Q8TDR2 534 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 MUC3BQ9H195 1237 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 EHMT1Q9H9B1 1298 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 PRDM10Q9NQV6 1147 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 TMEM39AQ9NV64 488 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 PLAAQ9Y263 795 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 PCDHB14Q9Y5E9 798 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 PLEKHH1Q9ULM0 1364 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 UHRF1BP1LA0JNW5 1464 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 NKTRP30414 1462 aaKnown RBP6.92□□□□□ -1.3
DDX42-210ENST00000579539 TEX14Q8IWB6 1497 aa6.92□□□□□ -1.3
DDX42-210ENST00000579539 A0A1W2PQH9 124 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
DDX42-210ENST00000579539 TUBB4AP04350 444 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 H2AFB2P0C5Z0 115 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 SLFN14P0C7P3 912 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 LMNB1P20700 586 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 CALRP27797 417 aaKnown RBP6.91□□□□□ -1.3
DDX42-210ENST00000579539 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 TEX35Q5T0J7 233 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 FAM178BQ8IXR5 827 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 SYNPOQ8N3V7 929 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 MNS1Q8NEH6 495 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 PBX4Q9BYU1 374 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 LACRTQ9GZZ8 138 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 CWC15Q9P013 229 aaKnown RBP6.91□□□□□ -1.3
DDX42-210ENST00000579539 USP25Q9UHP3 1055 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 V9GYY5 206 aaPredicted RBP6.91□□□□□ -1.3
DDX42-210ENST00000579539 FHOD3Q2V2M9 1422 aa6.91□□□□□ -1.3
DDX42-210ENST00000579539 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 PDE2AO00408 941 aaPredicted RBP6.9□□□□□ -1.3
DDX42-210ENST00000579539 TM4SF5O14894 197 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 HTATSF1O43719 755 aaKnown RBP6.9□□□□□ -1.3
DDX42-210ENST00000579539 BPNT1O95861 308 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 BRDTQ58F21 947 aaPredicted RBP6.9□□□□□ -1.3
DDX42-210ENST00000579539 GORABQ5T7V8 394 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 MAP4K3Q8IVH8 894 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 KRT222Q8N1A0 295 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 TMEM130Q8N3G9 435 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 GALNT11Q8NCW6 608 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 GRIN3AQ8TCU5 1115 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.3
DDX42-210ENST00000579539 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
DDX42-210ENST00000579539 ATP8A1Q9Y2Q0 1164 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 EID1Q9Y6B2 187 aa6.9□□□□□ -1.3
DDX42-210ENST00000579539 CLASP1Q7Z460 1538 aa6.9□□□□□ -1.31
DDX42-210ENST00000579539 ATP8B1O43520 1251 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 GRIN3BO60391 1043 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 ALX3O95076 343 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 ATE1O95260 518 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 FAM153BP0C7A2 387 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 NME2P22392 152 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 CNGA1P29973 690 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 CDC27P30260 824 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 STAT3P40763 770 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 MCM2P49736 904 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 PTPN11Q06124 597 aaPredicted RBP6.89□□□□□ -1.31
DDX42-210ENST00000579539 GPS2Q13227 327 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 ATP2B3Q16720 1220 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 FOXD4L6Q3SYB3 417 aaPredicted RBP6.89□□□□□ -1.31
DDX42-210ENST00000579539 TMEM67Q5HYA8 995 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 XP32Q5T750 250 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 FOXD4L3Q6VB84 417 aaPredicted RBP6.89□□□□□ -1.31
DDX42-210ENST00000579539 TTC6Q86TZ1 520 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 SULF2Q8IWU5 870 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 Q8N3U1 123 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 ZSWIM2Q8NEG5 633 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 ZNF669Q96BR6 464 aaPredicted RBP6.89□□□□□ -1.31
DDX42-210ENST00000579539 MFSD3Q96ES6 412 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 SLC26A8Q96RN1 970 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
DDX42-210ENST00000579539 LMBRD1Q9NUN5 540 aa6.89□□□□□ -1.31
DDX42-210ENST00000579539 MAGEC2Q9UBF1 373 aaPredicted RBP6.89□□□□□ -1.31
DDX42-210ENST00000579539 CYP8B1Q9UNU6 501 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms