RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 PRKAB2O43741 272 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 MBD4O95243 580 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 COPB2P35606 906 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 ADD2P35612 726 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 CDK8P49336 464 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 TLE2Q04725 743 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 C12orf60Q5U649 245 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
CASC3-206ENST00000579238 C16orf86Q6ZW13 317 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 RNF180Q86T96 592 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
CASC3-206ENST00000579238 XPNPEP3Q9NQH7 507 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 PAG1Q9NWQ8 432 aa10.31□□□□□ -0.76
CASC3-206ENST00000579238 ROBO3Q96MS0 1386 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 USP17L12C9JPN9 530 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 USP17L21D6R901 530 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 APBB1O00213 710 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 RAB11FIP3O75154 756 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 HMMRO75330 724 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 CLTBP09497 229 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 EEF2P13639 858 aaKnown RBP10.3□□□□□ -0.76
CASC3-206ENST00000579238 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
CASC3-206ENST00000579238 KCTD2Q14681 263 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 ZNF792Q3KQV3 632 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 SLFNL1Q499Z3 407 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 RPAP2Q8IXW5 612 aaPredicted RBP10.3□□□□□ -0.76
CASC3-206ENST00000579238 MAFAQ8NHW3 353 aaPredicted RBP10.3□□□□□ -0.76
CASC3-206ENST00000579238 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.765e-11■□□□□ 8
CASC3-206ENST00000579238 BOLA2Q9H3K6 86 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 KANSL2Q9H9L4 492 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 FBXO28Q9NVF7 368 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 PPP1R9AQ9ULJ8 1098 aa10.3□□□□□ -0.76
CASC3-206ENST00000579238 TMEM265A0A087WTH1 108 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 CYP2D7A0A087X1C5 515 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 SMIM22K7EJ46 135 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 VWA5AO00534 786 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 KIAA0355O15063 1070 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 PGK1P00558 417 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 PGK2P07205 417 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 ZNF865P0CJ78 1059 aaPredicted RBP10.29□□□□□ -0.76
CASC3-206ENST00000579238 MS4A1P11836 297 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 AKR1A1P14550 325 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 ATP5JP18859 108 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 ITGB8P26012 769 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 STAT3P40763 770 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 UBE3CQ15386 1083 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 HAUS7Q99871 368 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
CASC3-206ENST00000579238 TTYH1Q9H313 450 aaPredicted RBP10.29□□□□□ -0.76
CASC3-206ENST00000579238 ZNF214Q9UL59 606 aaPredicted RBP10.29□□□□□ -0.76
CASC3-206ENST00000579238 EYSQ5T1H1 3165 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 SMCHD1A6NHR9 2005 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 ZBED9Q6R2W3 1325 aa10.29□□□□□ -0.76
CASC3-206ENST00000579238 A0A1W2PQ45 241 aaPredicted RBP10.28□□□□□ -0.76
CASC3-206ENST00000579238 A0A1W2PQY0 241 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 RAG1P15918 1043 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 TAL1P17542 331 aaPredicted RBP10.28□□□□□ -0.76
CASC3-206ENST00000579238 FAM83BQ5T0W9 1011 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 SIRT2Q8IXJ6 389 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 MSL3Q8N5Y2 521 aaKnown RBP10.28□□□□□ -0.76
CASC3-206ENST00000579238 REPS2Q8NFH8 660 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 MYLIPQ8WY64 445 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
CASC3-206ENST00000579238 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 CNPY2Q9Y2B0 182 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 SLC4A4Q9Y6R1 1079 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 MYH8P13535 1937 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 ZNFX1Q9P2E3 1918 aaKnown RBP10.28□□□□□ -0.76
CASC3-206ENST00000579238 PARP14Q460N5 1801 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 VCANP13611 3396 aa10.28□□□□□ -0.76
CASC3-206ENST00000579238 BAZ2AQ9UIF9 1905 aaKnown RBP10.27□□□□□ -0.76
CASC3-206ENST00000579238 CDH23Q9H251 3354 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 RAD21O60216 631 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
CASC3-206ENST00000579238 EPHB4P54760 987 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 CTR9Q6PD62 1173 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 ANKRD33Q7Z3H0 272 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 KLHDC9Q8NEP7 349 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 NUP133Q8WUM0 1156 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.27□□□□□ -0.77
CASC3-206ENST00000579238 TEX13BQ9BXU2 312 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 STARD7Q9NQZ5 370 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 ZBTB40Q9NUA8 1239 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 TMEM39AQ9NV64 488 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 ARPP21Q9UBL0 812 aaPredicted RBP10.27□□□□□ -0.77
CASC3-206ENST00000579238 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 SYNGAP1Q96PV0 1343 aa10.27□□□□□ -0.77
CASC3-206ENST00000579238 COL11A1P12107 1806 aaPredicted RBP10.26□□□□□ -0.77
CASC3-206ENST00000579238 DNAJC25-GNG10A0A024R161 153 aa10.26□□□□□ -0.77
CASC3-206ENST00000579238 MOXD2PA6NHM9 499 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms