RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-210	ENST00000578557	HERVK_113	P62684	666 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	IRX6	P78412	446 aa	Predicted RBP	10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	AKNAD1	Q5T1N1	836 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	IQCA1	Q86XH1	822 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	DGKH	Q86XP1	1220 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	PRPF38A	Q8NAV1	312 aa	Known RBP	10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	GMCL1P1	Q8NEA9	526 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	NKX2-3	Q8TAU0	364 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CHURC1	Q8WUH1	139 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	STAG1	Q8WVM7	1258 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SOCS4	Q8WXH5	440 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	DYNLL2	Q96FJ2	89 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ABHD8	Q96I13	439 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TRIM47	Q96LD4	638 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SEC62	Q99442	399 aa	Known RBP	10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SRRD	Q9UH36	339 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TRIM17	Q9Y577	477 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	PLIN4	Q96Q06	1357 aa		10.14	□□□□□ -0.79
PPP4R1-210	ENST00000578557	AKAP11	Q9UKA4	1901 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ADGRA2	Q96PE1	1338 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	IGKV6D-41	A0A0C4DH26	115 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	EEF2	P13639	858 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	AKR1B1	P15121	316 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	VCAM1	P19320	739 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CHML	P26374	656 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TFAP4	Q01664	338 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	FAM160B2	Q86V87	743 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ABRA	Q8N0Z2	381 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SHCBP1	Q8NEM2	672 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	FAM227B	Q96M60	508 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	P2RX7	Q99572	595 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	MROH8	Q9H579	483 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TSKS	Q9UJT2	592 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	FEM1B	Q9UK73	627 aa		10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
PPP4R1-210	ENST00000578557	MAST2	Q6P0Q8	1798 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	MYH2	Q9UKX2	1941 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557		A0A0D9SFI3	127 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557		F5H6K3	240 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TNPO2	O14787	897 aa	Known RBP	10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ST18	O60284	1047 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CYP2C8	P10632	490 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CYP2D6	P10635	497 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	OAZ1	P54368	228 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	UBXN2A	P68543	259 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	KLRC3	Q07444	240 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TRAF1	Q13077	416 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SART3	Q15020	963 aa	Known RBP	10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SLFNL1	Q499Z3	407 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TREML2	Q5T2D2	321 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	RNF20	Q5VTR2	975 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TMTC2	Q8N394	836 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CD99L2	Q8TCZ2	262 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	RAET1E	Q8TD07	263 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	PTCD2	Q8WV60	388 aa	Known RBP	10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ARMC5	Q96C12	935 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	GMCL1	Q96IK5	515 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	R3HDML	Q9H3Y0	253 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CLIP2	Q9UDT6	1046 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CPA4	Q9UI42	421 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ADAMTS5	Q9UNA0	930 aa		10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557	POLR2A	P24928	1970 aa	Known RBP	10.12	□□□□□ -0.79
PPP4R1-210	ENST00000578557		A0A1W2PRG0	241 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ATP2A1	O14983	1001 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SGSM2	O43147	1006 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	RANBP6	O60518	1105 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ZBED4	O75132	1171 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TOP1	P11387	765 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	GSPT1	P15170	499 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ERVK-9	P63128	1117 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ERVK-24	P63145	666 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	JAG1	P78504	1218 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CAMK2B	Q13554	666 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SIAH1	Q8IUQ4	282 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ANKRD13C	Q8N6S4	541 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ACER1	Q8TDN7	264 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ANKS1A	Q92625	1134 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	MAP4K1	Q92918	833 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	NUDT12	Q9BQG2	462 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CWC22	Q9HCG8	908 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	RBPJL	Q9UBG7	517 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	FBXO40	Q9UH90	709 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	IVNS1ABP	Q9Y6Y0	642 aa		10.11	□□□□□ -0.79
PPP4R1-210	ENST00000578557	MYH13	Q9UKX3	1938 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CYP2D7	A0A087X1C5	515 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	ERICH2	A1L162	156 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SLC15A5	A6NIM6	579 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	CHGB	P05060	677 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	RGS19	P49795	217 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SLC4A8	Q2Y0W8	1093 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SLC9C1	Q4G0N8	1177 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	GPATCH4	Q5T3I0	446 aa	Known RBP	10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	SLC44A5	Q8NCS7	719 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	DCAF4	Q8WV16	495 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TANGO6	Q9C0B7	1094 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	TOMM22	Q9NS69	142 aa		10.1	□□□□□ -0.79
PPP4R1-210	ENST00000578557	HPS5	Q9UPZ3	1129 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms