RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 MYH8P13535 1937 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 CCDC196A0A1B0GTZ2 297 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 OSBPP22059 807 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 GNAQP50148 359 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
LINC01543-201ENST00000578367 APOA5Q6Q788 366 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 BTNL9Q6UXG8 535 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 LBX2Q6XYB7 198 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 IFNL1Q8IU54 200 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 ZNF654Q8IZM8 581 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 BRF1Q92994 677 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 CFHR5Q9BXR6 569 aa16.2■□□□□ 0.18
LINC01543-201ENST00000578367 RBM28Q9NW13 759 aaKnown RBP16.2■□□□□ 0.18
LINC01543-201ENST00000578367 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
LINC01543-201ENST00000578367 NID2Q14112 1375 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 ZBTB43O43298 467 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 CPA1P15085 419 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 COL9A3Q14050 684 aaPredicted RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 COG2Q14746 738 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 DNAJC5GQ8N7S2 189 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 MB21D1Q8N884 522 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 PARK7Q99497 189 aaKnown RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
LINC01543-201ENST00000578367 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
LINC01543-201ENST00000578367 ATAD5Q96QE3 1844 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
LINC01543-201ENST00000578367 PDHXO00330 501 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 CA12O43570 354 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 STAT2P52630 851 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
LINC01543-201ENST00000578367 HTRA3P83110 453 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 GRM4Q14833 912 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 KIAA1755Q5JYT7 1200 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
LINC01543-201ENST00000578367 ZSCAN31Q96LW9 406 aaPredicted RBP16.18■□□□□ 0.18
LINC01543-201ENST00000578367 PTPN18Q99952 460 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 SAGE1Q9NXZ1 904 aa16.18■□□□□ 0.18
LINC01543-201ENST00000578367 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 AOC2O75106 756 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
LINC01543-201ENST00000578367 GRM1Q13255 1194 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 FAM83BQ5T0W9 1011 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 SPICE1Q8N0Z3 855 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 TANGO6Q9C0B7 1094 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
LINC01543-201ENST00000578367 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
LINC01543-201ENST00000578367 IGF2BP3O00425 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC01543-201ENST00000578367 RAD21O60216 631 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 DHX16O60231 1041 aaKnown RBP16.16■□□□□ 0.18
LINC01543-201ENST00000578367 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
LINC01543-201ENST00000578367 DSG3P32926 999 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 AK2P54819 239 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 CCDC96Q2M329 555 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 SLF1Q9BQI6 1058 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 ASCC2Q9H1I8 757 aaPredicted RBP16.16■□□□□ 0.18
LINC01543-201ENST00000578367 ZFYVE28Q9HCC9 887 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
LINC01543-201ENST00000578367 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 PPP1R9AQ9ULJ8 1098 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 ADAMTS5Q9UNA0 930 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
LINC01543-201ENST00000578367 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 FLOT1O75955 427 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 METAP2P50579 478 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC01543-201ENST00000578367 APOBRQ0VD83 1088 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 TRAF1Q13077 416 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 RTN1Q16799 776 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
LINC01543-201ENST00000578367 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 NUP133Q8WUM0 1156 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 ZIC5Q96T25 663 aa16.15■□□□□ 0.18
LINC01543-201ENST00000578367 LOC285556D6RIA3 1793 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 KLRF2D3W0D1 207 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 ATP2A1O14983 1001 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 OAZ1P54368 228 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 HERVK_113P62684 666 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 TAF1CQ15572 869 aaPredicted RBP16.14■□□□□ 0.17
LINC01543-201ENST00000578367 CPLX2Q6PUV4 134 aaKnown RBP16.14■□□□□ 0.17
LINC01543-201ENST00000578367 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 BEGAINQ9BUH8 593 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms