RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 KCNH4Q9UQ05 1017 aa7.89□□□□□ -1.15
PPP4R1-207ENST00000578010 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
PPP4R1-207ENST00000578010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
PPP4R1-207ENST00000578010 DDX60LQ5H9U9 1706 aaKnown RBP7.89□□□□□ -1.15
PPP4R1-207ENST00000578010 COL2A1P02458 1487 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 ZMYM6O95789 1325 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 A0A0G2JLL6 359 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 A0A1W2PRG0 241 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 TESPA1A2RU30 521 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 BTBD19C9JJ37 291 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 PDHXO00330 501 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 ARHGAP33O14559 1287 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 CA12O43570 354 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 NMT2O60551 498 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 TTLL1O95922 423 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 OSBPP22059 807 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 LBX1P52954 281 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 DGKZQ13574 1117 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 CCDC178Q5BJE1 867 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 CHST3Q7LGC8 479 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 PRRT2Q7Z6L0 340 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 IQCA1Q86XH1 822 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 CLEC10AQ8IUN9 316 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 SPICE1Q8N0Z3 855 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 NCOA7Q8NI08 942 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 UBAC1Q9BSL1 405 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 USP26Q9BXU7 913 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 NBPF3Q9H094 633 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 KIAA1683Q9H0B3 1180 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 SH2D4AQ9H788 454 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 ZFYVE28Q9HCC9 887 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 WBP1LQ9NX94 342 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 TMX2Q9Y320 296 aa7.88□□□□□ -1.15
PPP4R1-207ENST00000578010 ERICH2A1L162 156 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 F5H6K3 240 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 IGF2BP3O00425 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 DPYSL4O14531 572 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 IFIT3O14879 490 aaKnown RBP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 HSPA8P11142 646 aaKnown RBP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 KLRC3Q07444 240 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 KRT32Q14532 448 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 SART3Q15020 963 aaKnown RBP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 TAF1CQ15572 869 aaPredicted RBP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 SLFN13Q68D06 897 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 GPAT2Q6NUI2 795 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 ANKRD23Q86SG2 305 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 LRRC47Q8N1G4 583 aaKnown RBP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 FAM43AQ8N2R8 423 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 MKL1Q969V6 931 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 TTC14Q96N46 770 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 NEK1Q96PY6 1258 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 ZSCAN10Q96SZ4 725 aaPredicted RBP7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 IL17RBQ9NRM6 502 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 TCP11L1Q9NUJ3 509 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 TAF6LQ9Y6J9 622 aa7.87□□□□□ -1.15
PPP4R1-207ENST00000578010 NEDD4P46934 1319 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 IGKV6D-41A0A0C4DH26 115 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L15C9J2P7 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L13C9JLJ4 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L11C9JVI0 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L18D6R9N7 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L22D6RA61 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L17D6RBQ6 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L19D6RCP7 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L20D6RJB6 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 PRC1O43663 620 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 CYP2C8P10632 490 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 TOP1P11387 765 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 PSMA5P28066 241 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 MCM5P33992 734 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 HSPA4P34932 840 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 NT5C2P49902 561 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 FGD1P98174 961 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 USP17L24Q0WX57 530 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 TMEM67Q5HYA8 995 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 TREML2Q5T2D2 321 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 IFIT1BQ5T764 474 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 NFXL1Q6ZNB6 911 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 STOX1Q6ZVD7 989 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 CYB5R4Q7L1T6 521 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 DGKHQ86XP1 1220 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 SPNS2Q8IVW8 549 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 ZNF454Q8N9F8 522 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 NKX2-3Q8TAU0 364 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 JAKMIP1Q96N16 626 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 TMEM47Q9BQJ4 181 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 TANGO6Q9C0B7 1094 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 RPAP3Q9H6T3 665 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 VCPKMTQ9H867 229 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 KAT14Q9H8E8 782 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 HOXC10Q9NYD6 342 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms