RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 FAM196BA6NMK8 535 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 KLRF2D3W0D1 207 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 BAG4O95429 457 aaKnown RBP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 EEF2P13639 858 aaKnown RBP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 MAP3K9P80192 1104 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 FMR1Q06787 632 aaKnown RBP eCLIP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 ZNF543Q08ER8 600 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 TTLL12Q14166 644 aaPredicted RBP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 SEPT2Q15019 361 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 PFKFB3Q16875 520 aaPredicted RBP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 SIAH1Q8IUQ4 282 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 CCDC144CPQ8IYA2 1237 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 ANKRD13AQ8IZ07 590 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 SRBD1Q8N5C6 995 aaKnown RBP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 TMEM87AQ8NBN3 555 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.4□□□□□ -0.1
TSEN54-204ENST00000577197 WRNIP1Q96S55 665 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 SLC26A6Q9BXS9 759 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 GOPCQ9HD26 462 aa14.4□□□□□ -0.1
TSEN54-204ENST00000577197 PLEKHA8P1O95397 391 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 SLURP2P0DP57 97 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 U2AF2P26368 475 aaKnown RBP eCLIP14.39□□□□□ -0.11
TSEN54-204ENST00000577197 MCM4P33991 863 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 PRKG1Q13976 671 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 NFKBIBQ15653 356 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 PKN1Q16512 942 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 LDLRAD1Q5T700 205 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 CST9Q5W186 159 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 BTNL9Q6UXG8 535 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
TSEN54-204ENST00000577197 LPAR1Q92633 364 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 PHKBQ93100 1093 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
TSEN54-204ENST00000577197 TRPM7Q96QT4 1865 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 GDF11O95390 407 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 SCG2P13521 617 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 CALML3P27482 149 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 TRAF1Q13077 416 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 RESTQ13127 1097 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 RRP1BQ14684 758 aaKnown RBP14.38□□□□□ -0.11
TSEN54-204ENST00000577197 SAFBQ15424 915 aaKnown RBP eCLIP14.38□□□□□ -0.11
TSEN54-204ENST00000577197 PPP1R18Q6NYC8 613 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 RAB11FIP4Q86YS3 637 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 CCDC148Q8NFR7 591 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 MTMR8Q96EF0 704 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 KIAA1683Q9H0B3 1180 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 FOXP1Q9H334 677 aaPredicted RBP14.38□□□□□ -0.11
TSEN54-204ENST00000577197 CSADQ9Y600 493 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 MYH15Q9Y2K3 1946 aa14.38□□□□□ -0.11
TSEN54-204ENST00000577197 ESYT2A0FGR8 921 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 TMEM88BA6NKF7 163 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 F5H6K3 240 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 MMP1P03956 469 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 INPP5BP32019 993 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 SLC1A4P43007 532 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 USP14P54578 494 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 KLRC3Q07444 240 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 KRT40Q6A162 431 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
TSEN54-204ENST00000577197 LRRC47Q8N1G4 583 aaKnown RBP14.37□□□□□ -0.11
TSEN54-204ENST00000577197 DAGLBQ8NCG7 672 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
TSEN54-204ENST00000577197 SCAND2PQ9GZW5 306 aaPredicted RBP14.37□□□□□ -0.11
TSEN54-204ENST00000577197 AS3MTQ9HBK9 375 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 BRMS1Q9HCU9 246 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 CFAP45Q9UL16 551 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
TSEN54-204ENST00000577197 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
TSEN54-204ENST00000577197 ELP1O95163 1332 aa14.37□□□□□ -0.11
TSEN54-204ENST00000577197 UBE2Q2LH0YL09 131 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 CYTH3O43739 400 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 KRT85P78386 507 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 KIF23Q02241 960 aaPredicted RBP14.36□□□□□ -0.11
TSEN54-204ENST00000577197 VGLL4Q14135 290 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
TSEN54-204ENST00000577197 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 ZNF396Q96N95 335 aaPredicted RBP14.36□□□□□ -0.11
TSEN54-204ENST00000577197 PHF20Q9BVI0 1012 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 GLT8D2Q9H1C3 349 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 VCPKMTQ9H867 229 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 SEC63Q9UGP8 760 aaKnown RBP14.36□□□□□ -0.11
TSEN54-204ENST00000577197 PNMA2Q9UL42 364 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
TSEN54-204ENST00000577197 NDUFB10O96000 172 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 APLP1P51693 650 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 JAG1P78504 1218 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 USP17L2Q6R6M4 530 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 MOB2Q70IA6 237 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 SAPCD2Q86UD0 394 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
TSEN54-204ENST00000577197 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 C12orf42Q96LP6 360 aa14.35□□□□□ -0.11
TSEN54-204ENST00000577197 SNCAIPQ9Y6H5 919 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms