RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TSPAN10Q9H1Z9 355 aaPredicted RBP7.79□□□□□ -1.16
NUP88-212ENST00000576708 ELP3Q9H9T3 547 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 SENP2Q9HC62 589 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 SMC4Q9NTJ3 1288 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 SCHIP1Q9P0W5 487 aaPredicted RBP7.79□□□□□ -1.16
NUP88-212ENST00000576708 PPP2R3BQ9Y5P8 575 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 MANSC4A6NHS7 340 aaPredicted RBP7.78□□□□□ -1.16
NUP88-212ENST00000576708 M0R2N6 131 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 PRMT3O60678 531 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 FKTNO75072 461 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 FRAT2O75474 233 aaPredicted RBP7.78□□□□□ -1.16
NUP88-212ENST00000576708 FGFR2P21802 821 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 GPC1P35052 558 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 MTFR1Q15390 333 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 TRMT2AQ8IZ69 625 aaKnown RBP7.78□□□□□ -1.16
NUP88-212ENST00000576708 SCG3Q8WXD2 468 aaKnown RBP7.78□□□□□ -1.16
NUP88-212ENST00000576708 PTPN18Q99952 460 aa7.78□□□□□ -1.16
NUP88-212ENST00000576708 NOB1Q9ULX3 412 aaKnown RBP7.78□□□□□ -1.16
NUP88-212ENST00000576708 EYA2O00167 538 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 ZBTB48P10074 688 aaPredicted RBP7.77□□□□□ -1.17
NUP88-212ENST00000576708 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
NUP88-212ENST00000576708 CAP1Q01518 475 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 ALDH1L2Q3SY69 923 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 CAVIN4Q5BKX8 364 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
NUP88-212ENST00000576708 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.77□□□□□ -1.17
NUP88-212ENST00000576708 ATG9AQ7Z3C6 839 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 ANKRD13AQ8IZ07 590 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 OPTNQ96CV9 577 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 SIL1Q9H173 461 aa7.77□□□□□ -1.17
NUP88-212ENST00000576708 CDK2AP1O14519 115 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 IFIT1P09914 478 aaKnown RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 FOXK2Q01167 660 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 CRHR2Q13324 411 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 TNFAIP1Q13829 316 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 VGLL4Q14135 290 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 PUM3Q15397 648 aaKnown RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 C4orf17Q53FE4 359 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 NOM1Q5C9Z4 860 aaKnown RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 APOBEC3HQ6NTF7 200 aaKnown RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 FBXO46Q6PJ61 603 aaPredicted RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 CD99L2Q8TCZ2 262 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 TBC1D22AQ8WUA7 517 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 TEKT1Q969V4 418 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 KIFC2Q96AC6 838 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 CFHR5Q9BXR6 569 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 PA2G4Q9UQ80 394 aaKnown RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 TNNQ9UQP3 1299 aa7.76□□□□□ -1.17
NUP88-212ENST00000576708 LRRFIP2Q9Y608 721 aaKnown RBP7.76□□□□□ -1.17
NUP88-212ENST00000576708 ARAP2Q8WZ64 1704 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 OTOFQ9HC10 1997 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 UBTFL1P0CB47 393 aaPredicted RBP7.75□□□□□ -1.17
NUP88-212ENST00000576708 SLC5A1P13866 664 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 ADORA1P30542 326 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 PLA2G4AP47712 749 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 TNNI2P48788 182 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 INHBEP58166 350 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 PKN2Q16513 984 aaKnown RBP7.75□□□□□ -1.17
NUP88-212ENST00000576708 ATP2B3Q16720 1220 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 SWI5Q1ZZU3 235 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.75□□□□□ -1.17
NUP88-212ENST00000576708 GNASQ5JWF2 1037 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 SH3PXD2AQ5TCZ1 1133 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 OTOP1Q7RTM1 612 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.75□□□□□ -1.17
NUP88-212ENST00000576708 RHBDD1Q8TEB9 315 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 BRI3BPQ8WY22 251 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 ZKSCAN4Q969J2 545 aaPredicted RBP7.75□□□□□ -1.17
NUP88-212ENST00000576708 ZDHHC15Q96MV8 337 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 MEIS3Q99687 375 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 TRIM17Q9Y577 477 aa7.75□□□□□ -1.17
NUP88-212ENST00000576708 TNRC18O15417 2968 aaPredicted RBP7.74□□□□□ -1.17
NUP88-212ENST00000576708 CCL15-CCL14A0A0B4J2E2 113 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 UNCXA6NJT0 531 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 PRDX5P30044 214 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 PHKA1P46020 1223 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 HDLBPQ00341 1268 aaKnown RBP7.74□□□□□ -1.17
NUP88-212ENST00000576708 TCP10Q12799 353 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 CCL15Q16663 113 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 MIGA2Q7L4E1 593 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 TAS1R3Q7RTX0 852 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 FAM43AQ8N2R8 423 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 LPIN2Q92539 896 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 SNCAIPQ9Y6H5 919 aa7.74□□□□□ -1.17
NUP88-212ENST00000576708 SPATA31C2B4DYI2 1134 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 SLURP2P0DP57 97 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 INPP5BP32019 993 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 SCNN1AP37088 669 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 RARSP54136 660 aaKnown RBP7.73□□□□□ -1.17
NUP88-212ENST00000576708 TIMM10P62072 90 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 NFIAQ12857 509 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 OTUD7BQ6GQQ9 843 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 CDC42EP5Q6NZY7 148 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 HHIPL2Q6UWX4 724 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 ZFPM1Q8IX07 1006 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 ZNF295-AS1Q8N0V1 137 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 WDR66Q8TBY9 1149 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 ZDHHC1Q8WTX9 485 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms