RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 COL9A1P20849 921 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 ITGB8P26012 769 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 STAT3P40763 770 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 EPHB4P54760 987 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 ICA1Q05084 483 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 PPIGQ13427 754 aaKnown RBP eCLIP10.88□□□□□ -0.671e-7■■□□□ 13.8
SMG6-218ENST00000575454 TMEM132BQ14DG7 1078 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 SLC9C2Q5TAH2 1124 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 RIOX2Q8IUF8 465 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 ANTXR1Q9H6X2 564 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 STARD7Q9NQZ5 370 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 TLR7Q9NYK1 1049 aaKnown RBP10.88□□□□□ -0.67
SMG6-218ENST00000575454 RAPGEFL1Q9UHV5 662 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 FAM184BQ9ULE4 1060 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 ADAMTS5Q9UNA0 930 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 ELP1O95163 1332 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 ZNF865P0CJ78 1059 aaPredicted RBP10.87□□□□□ -0.67
SMG6-218ENST00000575454 ACLYP53396 1101 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 ZNF792Q3KQV3 632 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 HSP90AB4PQ58FF6 505 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 MFSD5Q6N075 450 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 AACSQ86V21 672 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 GLT1D1Q96MS3 346 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 KANSL2Q9H9L4 492 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
SMG6-218ENST00000575454 DCP1AQ9NPI6 582 aaPredicted RBP10.87□□□□□ -0.67
SMG6-218ENST00000575454 DOCK3Q8IZD9 2030 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 VWA5AO00534 786 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 ADAMTS4O75173 837 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 PGK2P07205 417 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 PDE6AP16499 860 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 MRPS5P82675 430 aaKnown RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 KIAA1755Q5JYT7 1200 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 PSRC1Q6PGN9 363 aaPredicted RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 FTSJ3Q8IY81 847 aaKnown RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 PCSK9Q8NBP7 692 aaKnown RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 ASB2Q96Q27 587 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 MTIF3Q9H2K0 278 aaKnown RBP10.86□□□□□ -0.67
SMG6-218ENST00000575454 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 MSRAQ9UJ68 235 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 PLXNB2O15031 1838 aa10.86□□□□□ -0.67
SMG6-218ENST00000575454 SYNGAP1Q96PV0 1343 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 DUSP11O75319 330 aaKnown RBP10.85□□□□□ -0.67
SMG6-218ENST00000575454 AKR1B1P15121 316 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 TAL1P17542 331 aaPredicted RBP10.85□□□□□ -0.67
SMG6-218ENST00000575454 RAB30Q15771 203 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 KCNA10Q16322 511 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 SIAH1Q8IUQ4 282 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 USP38Q8NB14 1042 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 KLHDC9Q8NEP7 349 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMG6-218ENST00000575454 DDX11Q96FC9 970 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 THEGQ9P2T0 379 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 TBX21Q9UL17 535 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 PPP1R9AQ9ULJ8 1098 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
SMG6-218ENST00000575454 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
SMG6-218ENST00000575454 CST5P28325 142 aaPredicted RBP10.84□□□□□ -0.67
SMG6-218ENST00000575454 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 RASIP1Q5U651 963 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 CCSAPQ6IQ19 270 aaPredicted RBP10.84□□□□□ -0.67
SMG6-218ENST00000575454 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 ZNF467Q7Z7K2 595 aaPredicted RBP10.84□□□□□ -0.67
SMG6-218ENST00000575454 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 SDR42E1Q8WUS8 393 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 VTI1AQ96AJ9 217 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMG6-218ENST00000575454 PBX4Q9BYU1 374 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
SMG6-218ENST00000575454 TNNQ9UQP3 1299 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 SYNRGQ9UMZ2 1314 aa10.84□□□□□ -0.67
SMG6-218ENST00000575454 A0A0U1RQG5 324 aaPredicted RBP10.83□□□□□ -0.68
SMG6-218ENST00000575454 GOLIM4O00461 696 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 CYP2D6P10635 497 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 EEF2P13639 858 aaKnown RBP10.83□□□□□ -0.68
SMG6-218ENST00000575454 CDK8P49336 464 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 CDK7P50613 346 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 C12orf60Q5U649 245 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
SMG6-218ENST00000575454 LCORLQ8N3X6 602 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 ADAMTS19Q8TE59 1207 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 PPM1EQ8WY54 764 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms