RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.25□□□□□ -0.13
USP43-206ENST00000575346 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
USP43-206ENST00000575346 MTMR4Q9NYA4 1195 aa14.25□□□□□ -0.13
USP43-206ENST00000575346 MYH4Q9Y623 1939 aa14.25□□□□□ -0.13
USP43-206ENST00000575346 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 F5H6K3 240 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 IGHA2P01877 340 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 SDSP20132 328 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 KLRC3Q07444 240 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 TRIM32Q13049 653 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 PPP1R9AQ9ULJ8 1098 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 IVNS1ABPQ9Y6Y0 642 aa14.24□□□□□ -0.13
USP43-206ENST00000575346 TTLL1O95922 423 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 TSPY3P0CV98 308 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 TSPY8P0CW00 308 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 HSPD1P10809 573 aaKnown RBP14.23□□□□□ -0.13
USP43-206ENST00000575346 ZKSCAN1P17029 563 aaPredicted RBP14.23□□□□□ -0.13
USP43-206ENST00000575346 NOVP48745 357 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 TFAP4Q01664 338 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
USP43-206ENST00000575346 TMEM132BQ14DG7 1078 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 PPP4R3BQ5MIZ7 849 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 FAM83BQ5T0W9 1011 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
USP43-206ENST00000575346 ABRAQ8N0Z2 381 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 REPS2Q8NFH8 660 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 RILPL2Q969X0 211 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 MROH8Q9H579 483 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
USP43-206ENST00000575346 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
USP43-206ENST00000575346 COL11A1P12107 1806 aaPredicted RBP14.22□□□□□ -0.13
USP43-206ENST00000575346 CCDC171Q6TFL3 1326 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 VWA5AO00534 786 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 ORC4O43929 436 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 SLC25A27O95847 323 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 NDUFB10O96000 172 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 FGAP02671 866 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
USP43-206ENST00000575346 ERCC3P19447 782 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 CCL14Q16627 93 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 RIOX2Q8IUF8 465 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 ANKLE1Q8NAG6 615 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
USP43-206ENST00000575346 ZNF214Q9UL59 606 aaPredicted RBP14.22□□□□□ -0.13
USP43-206ENST00000575346 HIP1O00291 1037 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 FARP2O94887 1054 aaPredicted RBP14.21□□□□□ -0.13
USP43-206ENST00000575346 FXR1P51114 621 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP43-206ENST00000575346 MFAP1P55081 439 aaKnown RBP14.21□□□□□ -0.13
USP43-206ENST00000575346 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 CACNB2Q08289 660 aaPredicted RBP14.21□□□□□ -0.13
USP43-206ENST00000575346 FAM47AQ5JRC9 791 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 WDR78Q5VTH9 848 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 PRPF38AQ8NAV1 312 aaKnown RBP14.21□□□□□ -0.13
USP43-206ENST00000575346 NPLOC4Q8TAT6 608 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 SLF1Q9BQI6 1058 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 COLQQ9Y215 455 aaPredicted RBP14.21□□□□□ -0.13
USP43-206ENST00000575346 TACC3Q9Y6A5 838 aa14.21□□□□□ -0.13
USP43-206ENST00000575346 ATP2A1O14983 1001 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
USP43-206ENST00000575346 PCP11498 1178 aaKnown RBP14.2□□□□□ -0.14
USP43-206ENST00000575346 PDE4AP27815 886 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 ADORA2AP29274 412 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 COPB2P35606 906 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 OLFML2BQ68BL8 750 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 NUP88Q99567 741 aaPredicted RBP14.2□□□□□ -0.14
USP43-206ENST00000575346 IL17RBQ9NRM6 502 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 FLRT1Q9NZU1 646 aa14.2□□□□□ -0.14
USP43-206ENST00000575346 TSPY2A6NKD2 308 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 RAD21O60216 631 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 STAT3P40763 770 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 MNX1P50219 401 aaPredicted RBP14.19□□□□□ -0.14
USP43-206ENST00000575346 PLS1Q14651 629 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 MFSD14CQ5VZR4 134 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 DPP9Q86TI2 863 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 NCAPG2Q86XI2 1143 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 LRRC47Q8N1G4 583 aaKnown RBP14.19□□□□□ -0.14
USP43-206ENST00000575346 GMCL1Q96IK5 515 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 HTATIP2Q9BUP3 242 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 TCP11L1Q9NUJ3 509 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 FEM1BQ9UK73 627 aa14.19□□□□□ -0.14
USP43-206ENST00000575346 ZNFX1Q9P2E3 1918 aaKnown RBP14.18□□□□□ -0.14
USP43-206ENST00000575346 H0YGN5 161 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 PLA2G6O60733 806 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 COBLO75128 1261 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 FDX1P10109 184 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 FCER1AP12319 257 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 NT5C2P49902 561 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 LHX8Q68G74 356 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP43-206ENST00000575346 SLC5A4Q9NY91 659 aa14.18□□□□□ -0.14
USP43-206ENST00000575346 DIS3Q9Y2L1 958 aaKnown RBP14.18□□□□□ -0.14
USP43-206ENST00000575346 RANBP6O60518 1105 aaKnown RBP14.17□□□□□ -0.14
USP43-206ENST00000575346 BMP3P12645 472 aa14.17□□□□□ -0.14
USP43-206ENST00000575346 CCND3P30281 292 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms