RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 LRP8Q14114 963 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 TMEM201Q5SNT2 666 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 SLC6A19Q695T7 634 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 MCATQ8IVS2 390 aaKnown RBP6.44□□□□□ -1.38
TSR1-203ENST00000575049 WDR75Q8IWA0 830 aaKnown RBP6.44□□□□□ -1.38
TSR1-203ENST00000575049 MFSD2AQ8NA29 543 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 ANAPC16Q96DE5 110 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 SLC39A13Q96H72 371 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 LRRC4CQ9HCJ2 640 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 BRMS1Q9HCU9 246 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 BSDC1Q9NW68 430 aaPredicted RBP6.44□□□□□ -1.38
TSR1-203ENST00000575049 REV1Q9UBZ9 1251 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 COMMD10Q9Y6G5 202 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 A0A0U1RQG5 324 aaPredicted RBP6.43□□□□□ -1.38
TSR1-203ENST00000575049 SLITRK5O94991 958 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 MED26O95402 600 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 SLITRK4Q8IW52 837 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 CELF2-AS1Q8N7Q2 184 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 PNISRQ8TF01 805 aaKnown RBP6.43□□□□□ -1.38
TSR1-203ENST00000575049 XAGE3Q8WTP9 111 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 CPLX3Q8WVH0 158 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 NKD1Q969G9 470 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 MIPEPQ99797 713 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 DPH2Q9BQC3 489 aaPredicted RBP6.43□□□□□ -1.38
TSR1-203ENST00000575049 GNL3LQ9NVN8 582 aaKnown RBP6.43□□□□□ -1.38
TSR1-203ENST00000575049 ATP8A1Q9Y2Q0 1164 aa6.43□□□□□ -1.38
TSR1-203ENST00000575049 SMAD7O15105 426 aaKnown RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 EOMESO95936 686 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 POU3F3P20264 500 aaPredicted RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 IFRD2Q12894 506 aaPredicted RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 OS9Q13438 667 aaPredicted RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 COL9A2Q14055 689 aaPredicted RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 NFE2Q16621 373 aaPredicted RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 MSMPQ1L6U9 139 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 ARTNQ5T4W7 220 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 LETMD1Q6P1Q0 360 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 FAM214BQ7L5A3 538 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 FAM13CQ8NE31 585 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 FAM126AQ9BYI3 521 aaPredicted RBP6.42□□□□□ -1.38
TSR1-203ENST00000575049 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
TSR1-203ENST00000575049 CCDC189A1A4V9 331 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 PDPK1O15530 556 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 KCNQ2O43526 872 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 TSPAN6O43657 245 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 HYAL3O43820 417 aaPredicted RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 CAND2O75155 1236 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 WDHD1O75717 1129 aaPredicted RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 ATE1O95260 518 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 SPINK2P20155 84 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 MCM4P33991 863 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 FOXD4Q12950 439 aaPredicted RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 DALRD3Q5D0E6 543 aaKnown RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 TMTC2Q8N394 836 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 FAM181AQ8N9Y4 354 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 HEXIM2Q96MH2 286 aaKnown RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 PCMTD2Q9NV79 361 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 ZC3H7BQ9UGR2 993 aaKnown RBP6.41□□□□□ -1.38
TSR1-203ENST00000575049 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 GTF2IRD1Q9UHL9 959 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 U3KQE9 123 aa6.41□□□□□ -1.38
TSR1-203ENST00000575049 UPK3BL1B0FP48 263 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 UPK3BL2E5RIL1 263 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 DNAJA2O60884 412 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 LDHAP00338 332 aaKnown RBP6.4□□□□□ -1.38
TSR1-203ENST00000575049 ZNF165P49910 485 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 YARSP54577 528 aaKnown RBP6.4□□□□□ -1.38
TSR1-203ENST00000575049 RASGRF1Q13972 1273 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 C2orf27AQ580R0 203 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 TNNI3KQ59H18 835 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 DTX1Q86Y01 620 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 SLFN12Q8IYM2 578 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 REXO1Q8N1G1 1221 aaKnown RBP6.4□□□□□ -1.38
TSR1-203ENST00000575049 RIN3Q8TB24 985 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 SHDQ96IW2 340 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
TSR1-203ENST00000575049 EHMT1Q9H9B1 1298 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 MKNK2Q9HBH9 465 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 ZFP64Q9NPA5 681 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 PRDM5Q9NQX1 630 aaPredicted RBP6.4□□□□□ -1.38
TSR1-203ENST00000575049 ST7Q9NRC1 585 aa6.4□□□□□ -1.38
TSR1-203ENST00000575049 TPX2Q9ULW0 747 aaKnown RBP6.4□□□□□ -1.38
TSR1-203ENST00000575049 CHURC1-FNTBB4DL54 471 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
TSR1-203ENST00000575049 PLIN1O60240 522 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 ALDH1L1O75891 902 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 OXCT1P55809 520 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 CLCQ05315 142 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 HDAC1Q13547 482 aaPredicted RBP6.39□□□□□ -1.39
TSR1-203ENST00000575049 MLECQ14165 292 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 TCEA2Q15560 299 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 DDR2Q16832 855 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 ARHGAP27Q6ZUM4 889 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 CDH24Q86UP0 819 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 DDX42Q86XP3 938 aaKnown RBP eCLIP6.39□□□□□ -1.39
TSR1-203ENST00000575049 Q8N3U1 123 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms