RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 HERVK_113P62684 666 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
PFN1-203ENST00000574872 SEC23AQ15436 765 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 CCDC96Q2M329 555 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 TMEM67Q5HYA8 995 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.64
PFN1-203ENST00000574872 WTAPQ15007 396 aa19.08■□□□□ 0.64
PFN1-203ENST00000574872 KCTD1Q719H9 257 aa19.08■□□□□ 0.64
PFN1-203ENST00000574872 ANKRD13CQ8N6S4 541 aa19.08■□□□□ 0.64
PFN1-203ENST00000574872 PNMA1Q8ND90 353 aa19.08■□□□□ 0.64
PFN1-203ENST00000574872 ANKS1AQ92625 1134 aa19.08■□□□□ 0.64
PFN1-203ENST00000574872 GMCL1Q96IK5 515 aa19.08■□□□□ 0.64
PFN1-203ENST00000574872 FRMPD2Q68DX3 1309 aaPredicted RBP19.07■□□□□ 0.64
PFN1-203ENST00000574872 SPDYE16A6NNV3 312 aaPredicted RBP19.07■□□□□ 0.64
PFN1-203ENST00000574872 BMP3P12645 472 aa19.07■□□□□ 0.64
PFN1-203ENST00000574872 C17orf99Q6UX52 265 aa19.07■□□□□ 0.64
PFN1-203ENST00000574872 IGDCC4Q8TDY8 1250 aa19.07■□□□□ 0.64
PFN1-203ENST00000574872 ZNF296Q8WUU4 475 aaPredicted RBP19.07■□□□□ 0.64
PFN1-203ENST00000574872 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
PFN1-203ENST00000574872 TMEM232C9JQI7 657 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 SH2B2O14492 632 aaPredicted RBP19.06■□□□□ 0.64
PFN1-203ENST00000574872 PDHBP11177 359 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 BCRP11274 1271 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 CASTP20810 708 aaKnown RBP19.06■□□□□ 0.64
PFN1-203ENST00000574872 IKQ13123 557 aaPredicted RBP19.06■□□□□ 0.64
PFN1-203ENST00000574872 COG2Q14746 738 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 BLOC1S2Q6QNY1 142 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 POTEEQ6S8J3 1075 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 DHX32Q7L7V1 743 aaKnown RBP19.06■□□□□ 0.64
PFN1-203ENST00000574872 DCAF4Q8WV16 495 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 ATG4CQ96DT6 458 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 LY9Q9HBG7 655 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 TXNRD2Q9NNW7 524 aa19.06■□□□□ 0.64
PFN1-203ENST00000574872 FKTNO75072 461 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 DSG3P32926 999 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 GCLCP48506 637 aaPredicted RBP19.05■□□□□ 0.64
PFN1-203ENST00000574872 EXOSC10Q01780 885 aaKnown RBP19.05■□□□□ 0.64
PFN1-203ENST00000574872 SP3Q02447 781 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 KIFC2Q96AC6 838 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 TMEM87BQ96K49 555 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 SLF1Q9BQI6 1058 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 GPCPD1Q9NPB8 672 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 PPP1R9AQ9ULJ8 1098 aa19.05■□□□□ 0.64
PFN1-203ENST00000574872 HMGB1P09429 215 aaKnown RBP19.04■□□□□ 0.64
PFN1-203ENST00000574872 GOLGA8HP0CJ92 632 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 PSMA5P28066 241 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 TTBK2Q6IQ55 1244 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 NFXL1Q6ZNB6 911 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 CD99L2Q8TCZ2 262 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 HOXC10Q9NYD6 342 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 RBPJLQ9UBG7 517 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 FEM1BQ9UK73 627 aa19.04■□□□□ 0.64
PFN1-203ENST00000574872 CASP8AP2Q9UKL3 1982 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 CNMDO75829 334 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 SNHG28P0DPA3 235 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 SLC16A2P36021 539 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 STAT2P52630 851 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 ZNF543Q08ER8 600 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 FAM110CQ1W6H9 321 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 NOM1Q5C9Z4 860 aaKnown RBP19.03■□□□□ 0.64
PFN1-203ENST00000574872 RAB11FIP4Q86YS3 637 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 GTF3C2Q8WUA4 911 aaPredicted RBP19.03■□□□□ 0.64
PFN1-203ENST00000574872 MYL10Q9BUA6 226 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 UPF3BQ9BZI7 483 aaKnown RBP19.03■□□□□ 0.64
PFN1-203ENST00000574872 BTBD7Q9P203 1132 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 RLFQ13129 1914 aa19.03■□□□□ 0.64
PFN1-203ENST00000574872 WDR19Q8NEZ3 1342 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 CCDC69A6NI79 296 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 RPS6KB1P23443 525 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 FGD1P98174 961 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 CAP1Q01518 475 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 LBX2Q6XYB7 198 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 CATIPQ7Z7H3 387 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 NUP133Q8WUM0 1156 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 MTA3Q9BTC8 594 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 ARHGAP39Q9C0H5 1083 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
PFN1-203ENST00000574872 PARP14Q460N5 1801 aa19.02■□□□□ 0.63
PFN1-203ENST00000574872 MYPNQ86TC9 1320 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 VWA5AO00534 786 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 PARP1P09874 1014 aaKnown RBP19.01■□□□□ 0.63
PFN1-203ENST00000574872 SNAP25P60880 206 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 ERVK-9P63128 1117 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 ERVK-24P63145 666 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 LACTBP83111 547 aaPredicted RBP19.01■□□□□ 0.63
PFN1-203ENST00000574872 PLS1Q14651 629 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 Q3C1V9 767 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 Q6ZUG5 572 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 FAM160B2Q86V87 743 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 ZNF654Q8IZM8 581 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 PRPF38AQ8NAV1 312 aaKnown RBP19.01■□□□□ 0.63
PFN1-203ENST00000574872 CHURC1Q8WUH1 139 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 CPVLQ9H3G5 476 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 ZSWIM6Q9HCJ5 1215 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 MORF4L1Q9UBU8 362 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 CYP46A1Q9Y6A2 500 aa19.01■□□□□ 0.63
PFN1-203ENST00000574872 ZSWIM8A7E2V4 1837 aa19■□□□□ 0.63
PFN1-203ENST00000574872 RXRAP19793 462 aa19■□□□□ 0.63
PFN1-203ENST00000574872 CTGFP29279 349 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms