RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
NDE1-209ENST00000574109 BEGAINQ9BUH8 593 aa15.86■□□□□ 0.13
NDE1-209ENST00000574109 CFHR5Q9BXR6 569 aa15.86■□□□□ 0.13
NDE1-209ENST00000574109 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
NDE1-209ENST00000574109 RPAP3Q9H6T3 665 aaPredicted RBP15.86■□□□□ 0.13
NDE1-209ENST00000574109 NID2Q14112 1375 aa15.86■□□□□ 0.13
NDE1-209ENST00000574109 BTBD19C9JJ37 291 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 RAD21O60216 631 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 PLA2G6O60733 806 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 FDX1P10109 184 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 PDHBP11177 359 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 BMP3P12645 472 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 KIF5BP33176 963 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 CCDC96Q2M329 555 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 CHST3Q7LGC8 479 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 NKX2-3Q8TAU0 364 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 UPF3BQ9BZI7 483 aaKnown RBP15.85■□□□□ 0.13
NDE1-209ENST00000574109 TANGO6Q9C0B7 1094 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 SLC12A7Q9Y666 1083 aa15.85■□□□□ 0.13
NDE1-209ENST00000574109 MGAMO43451 1857 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 PDHXO00330 501 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 IGF2BP3O00425 579 aaKnown RBP eCLIP15.84■□□□□ 0.13
NDE1-209ENST00000574109 ST18O60284 1047 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 STAT2P52630 851 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 TAF1CQ15572 869 aaPredicted RBP15.84■□□□□ 0.13
NDE1-209ENST00000574109 GPAT2Q6NUI2 795 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 APOA5Q6Q788 366 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 LBX2Q6XYB7 198 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 Q6ZUG5 572 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 SPICE1Q8N0Z3 855 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 CTCFLQ8NI51 663 aaPredicted RBP15.84■□□□□ 0.13
NDE1-209ENST00000574109 CHURC1Q8WUH1 139 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 PDRG1Q9NUG6 133 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 FEM1BQ9UK73 627 aa15.84■□□□□ 0.13
NDE1-209ENST00000574109 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
NDE1-209ENST00000574109 GCLCP48506 637 aaPredicted RBP15.83■□□□□ 0.12
NDE1-209ENST00000574109 GNAQP50148 359 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 ZNF543Q08ER8 600 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 FAM83BQ5T0W9 1011 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 TREML2Q5T2D2 321 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 CATSPERGQ6ZRH7 1159 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 FAM43AQ8N2R8 423 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 JMYQ8N9B5 988 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 SMCR8Q8TEV9 937 aaPredicted RBP15.83■□□□□ 0.12
NDE1-209ENST00000574109 BRF1Q92994 677 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 ZFYVE28Q9HCC9 887 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 RBM28Q9NW13 759 aaKnown RBP15.83■□□□□ 0.12
NDE1-209ENST00000574109 PCNTO95613 3336 aa15.83■□□□□ 0.12
NDE1-209ENST00000574109 CCDC196A0A1B0GTZ2 297 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 ZBTB43O43298 467 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 FLOT1O75955 427 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 NEK4P51957 841 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 EVCP57679 992 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 TROAPQ12815 778 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 GRM4Q14833 912 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 TCEANC2Q96MN5 208 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 PTPN18Q99952 460 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 SLF1Q9BQI6 1058 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 LZTS2Q9BRK4 669 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 LRRC2Q9BYS8 371 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 ASCC2Q9H1I8 757 aaPredicted RBP15.82■□□□□ 0.12
NDE1-209ENST00000574109 HOXC10Q9NYD6 342 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
NDE1-209ENST00000574109 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
NDE1-209ENST00000574109 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 GOLGA8BA8MQT2 603 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 CPA1P15085 419 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 IKQ13123 557 aaPredicted RBP15.81■□□□□ 0.12
NDE1-209ENST00000574109 COG2Q14746 738 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 NOM1Q5C9Z4 860 aaKnown RBP15.81■□□□□ 0.12
NDE1-209ENST00000574109 BTNL9Q6UXG8 535 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 PRPF38AQ8NAV1 312 aaKnown RBP15.81■□□□□ 0.12
NDE1-209ENST00000574109 CHMP4CQ96CF2 233 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 ZIC5Q96T25 663 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 KIF2CQ99661 725 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 ZNF236Q9UL36 1845 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 PPP1R9AQ9ULJ8 1098 aa15.81■□□□□ 0.12
NDE1-209ENST00000574109 CASP8AP2Q9UKL3 1982 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 ADGRA2Q96PE1 1338 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 SPDYE16A6NNV3 312 aaPredicted RBP15.8■□□□□ 0.12
NDE1-209ENST00000574109 MCM2P49736 904 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 METAP2P50579 478 aaKnown RBP eCLIP15.8■□□□□ 0.12
NDE1-209ENST00000574109 HERVK_113P62684 666 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 DGKZQ13574 1117 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
NDE1-209ENST00000574109 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 MICU3Q86XE3 530 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 ZNF274Q96GC6 653 aaPredicted RBP15.8■□□□□ 0.12
NDE1-209ENST00000574109 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
NDE1-209ENST00000574109 GOLGA8AA7E2F4 631 aa15.79■□□□□ 0.12
NDE1-209ENST00000574109 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
NDE1-209ENST00000574109 TLR2O60603 784 aa15.79■□□□□ 0.12
NDE1-209ENST00000574109 SMARCA1P28370 1054 aa15.79■□□□□ 0.12
NDE1-209ENST00000574109 DSG3P32926 999 aa15.79■□□□□ 0.12
NDE1-209ENST00000574109 COPB2P35606 906 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms