RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 DDX20Q9UHI6 824 aaKnown RBP25.26■■□□□ 1.63
CHRNB1-206ENST00000574054 COBLO75128 1261 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 SYN1P17600 705 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 OLFML2BQ68BL8 750 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 TRPV1Q8NER1 839 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 PI4K2BQ8TCG2 481 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 ZBTB47Q9UFB7 747 aaPredicted RBP25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 ROBO3Q96MS0 1386 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 SZT2Q5T011 3432 aa25.25■■□□□ 1.63
CHRNB1-206ENST00000574054 MSCO60682 206 aa25.24■■□□□ 1.63
CHRNB1-206ENST00000574054 COL6A1P12109 1028 aa25.24■■□□□ 1.63
CHRNB1-206ENST00000574054 FCER1AP12319 257 aa25.24■■□□□ 1.63
CHRNB1-206ENST00000574054 ABRAQ8N0Z2 381 aa25.24■■□□□ 1.63
CHRNB1-206ENST00000574054 PPP1R9AQ9ULJ8 1098 aa25.24■■□□□ 1.63
CHRNB1-206ENST00000574054 ZNF236Q9UL36 1845 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 PRDM1O75626 825 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 SLC25A27O95847 323 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 CYBAP13498 195 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 MX1P20591 662 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 SEC62Q99442 399 aaKnown RBP25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 NUP88Q99567 741 aaPredicted RBP25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 NACAP1Q9BZK3 213 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 ZNF287Q9HBT7 754 aa25.23■■□□□ 1.63
CHRNB1-206ENST00000574054 PATL2C9JE40 543 aaKnown RBP25.22■■□□□ 1.63
CHRNB1-206ENST00000574054 VWA5AO00534 786 aa25.22■■□□□ 1.63
CHRNB1-206ENST00000574054 LRRC26Q2I0M4 334 aa25.22■■□□□ 1.63
CHRNB1-206ENST00000574054 ZNF444Q8N0Y2 327 aaPredicted RBP25.22■■□□□ 1.63
CHRNB1-206ENST00000574054 NYAP2Q9P242 653 aa25.22■■□□□ 1.63
CHRNB1-206ENST00000574054 ADAMTS5Q9UNA0 930 aa25.22■■□□□ 1.63
CHRNB1-206ENST00000574054 A0A1W2PPC1 479 aa25.21■■□□□ 1.63
CHRNB1-206ENST00000574054 IGHA2P01877 340 aa25.21■■□□□ 1.63
CHRNB1-206ENST00000574054 IFNL3Q8IZI9 196 aa25.21■■□□□ 1.63
CHRNB1-206ENST00000574054 MMP19Q99542 508 aa25.21■■□□□ 1.63
CHRNB1-206ENST00000574054 CLIP2Q9UDT6 1046 aa25.21■■□□□ 1.63
CHRNB1-206ENST00000574054 STAT3P40763 770 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 ANKRD45Q5TZF3 282 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 ANO1Q5XXA6 986 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 RIOX2Q8IUF8 465 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 GDF15Q99988 308 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 SLF1Q9BQI6 1058 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 SENP6Q9GZR1 1112 aaPredicted RBP25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 NAPBQ9H115 298 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 PARP14Q460N5 1801 aa25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 GREB1LQ9C091 1923 aaPredicted RBP25.2■■□□□ 1.62
CHRNB1-206ENST00000574054 FRMPD3Q5JV73 1810 aa25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 F5H6K3 240 aa25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 NDUFB10O96000 172 aa25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 MAGEA10P43363 369 aaPredicted RBP25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 KLRC3Q07444 240 aa25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 ZMYM1Q5SVZ6 1142 aa25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 MAML3Q96JK9 1138 aa25.19■■□□□ 1.62
CHRNB1-206ENST00000574054 LAMA3Q16787 3333 aa25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 MYCNP04198 464 aaPredicted RBP25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 PGK2P07205 417 aa25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 KCTD2Q14681 263 aa25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 PRAMEF19Q5SWL8 479 aa25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 ZNF214Q9UL59 606 aaPredicted RBP25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 COL11A1P12107 1806 aaPredicted RBP25.18■■□□□ 1.62
CHRNB1-206ENST00000574054 IGKV6D-41A0A0C4DH26 115 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 DNM1LO00429 736 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 SEPT4O43236 478 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 SLC3A2P08195 630 aaKnown RBP25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 COPB2P35606 906 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 PDE4BQ07343 736 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 GJC2Q5T442 439 aaPredicted RBP25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 REPS2Q8NFH8 660 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 CEP95Q96GE4 821 aa25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 YTHDC1Q96MU7 727 aaKnown RBP25.17■■□□□ 1.62
CHRNB1-206ENST00000574054 TSPY3P0CV98 308 aa25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 TSPY8P0CW00 308 aa25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 SLC4A3P48751 1232 aa25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 ATN1P54259 1190 aaPredicted RBP25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 CCDC129Q6ZRS4 1044 aa25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 LRRC47Q8N1G4 583 aaKnown RBP25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 MTMR4Q9NYA4 1195 aa25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 CTDP1Q9Y5B0 961 aaPredicted RBP25.16■■□□□ 1.62
CHRNB1-206ENST00000574054 TTLL1O95922 423 aa25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 BMP8BP34820 402 aa25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 PPARAQ07869 468 aa25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 FAM47AQ5JRC9 791 aa25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 SNRNP48Q6IEG0 339 aaKnown RBP25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 ARRDC4Q8NCT1 418 aa25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 TEX13BQ9BXU2 312 aa25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 ISY1Q9ULR0 285 aaKnown RBP25.15■■□□□ 1.62
CHRNB1-206ENST00000574054 SALL3Q9BXA9 1300 aa25.14■■□□□ 1.62
CHRNB1-206ENST00000574054 KBTBD13C9JR72 458 aa25.14■■□□□ 1.62
CHRNB1-206ENST00000574054 SOX1O00570 391 aaPredicted RBP25.14■■□□□ 1.62
CHRNB1-206ENST00000574054 PRPF38AQ8NAV1 312 aaKnown RBP25.14■■□□□ 1.62
CHRNB1-206ENST00000574054 KIFC2Q96AC6 838 aa25.14■■□□□ 1.62
CHRNB1-206ENST00000574054 UBE2OQ9C0C9 1292 aaKnown RBP25.14■■□□□ 1.62
CHRNB1-206ENST00000574054 ZBED4O75132 1171 aa25.13■■□□□ 1.61
CHRNB1-206ENST00000574054 TFAP4Q01664 338 aa25.13■■□□□ 1.61
CHRNB1-206ENST00000574054 CPXCR1Q8N123 301 aa25.13■■□□□ 1.61
CHRNB1-206ENST00000574054 NEDD1Q8NHV4 660 aa25.13■■□□□ 1.61
CHRNB1-206ENST00000574054 MYH4Q9Y623 1939 aa25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 HDAC1Q13547 482 aaPredicted RBP25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 ZNF792Q3KQV3 632 aa25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 MKL1Q969V6 931 aa25.12■■□□□ 1.61
CHRNB1-206ENST00000574054 EVI5LQ96CN4 794 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms