RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PLEKHM2Q8IWE5 1019 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 CCAR1Q8IX12 1150 aaKnown RBP20.79■□□□□ 0.92
SMG6-214ENST00000573827 NPLOC4Q8TAT6 608 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 CEP95Q96GE4 821 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 NACAP1Q9BZK3 213 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 MTMR4Q9NYA4 1195 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 PPP1R9AQ9ULJ8 1098 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 H0YGN5 161 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 NDUFB10O96000 172 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 FAM83BQ5T0W9 1011 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 LHX8Q68G74 356 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 CHD1LQ86WJ1 897 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 NEDD1Q8NHV4 660 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 NUP88Q99567 741 aaPredicted RBP20.78■□□□□ 0.92
SMG6-214ENST00000573827 NAPBQ9H115 298 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 HELLSQ9NRZ9 838 aa20.78■□□□□ 0.92
SMG6-214ENST00000573827 ZNF214Q9UL59 606 aaPredicted RBP20.78■□□□□ 0.92
SMG6-214ENST00000573827 COL11A1P12107 1806 aaPredicted RBP20.77■□□□□ 0.92
SMG6-214ENST00000573827 F5H6K3 240 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 VWA5AO00534 786 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 COBLO75128 1261 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 CCND3P30281 292 aaPredicted RBP20.77■□□□□ 0.92
SMG6-214ENST00000573827 KLRC3Q07444 240 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 ALX1Q15699 326 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 ANKLE1Q8NAG6 615 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 PAWRQ96IZ0 340 aaKnown RBP20.77■□□□□ 0.92
SMG6-214ENST00000573827 INCENPQ9NQS7 918 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 ZBTB47Q9UFB7 747 aaPredicted RBP20.77■□□□□ 0.92
SMG6-214ENST00000573827 ANAPC4Q9UJX5 808 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 SYNPO2Q9UMS6 1093 aa20.77■□□□□ 0.92
SMG6-214ENST00000573827 SUPT16HQ9Y5B9 1047 aaKnown RBP20.77■□□□□ 0.92
SMG6-214ENST00000573827 ALPK3Q96L96 1907 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 STRNO43815 780 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 FGRP09769 529 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 ADORA2AP29274 412 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 WDR78Q5VTH9 848 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
SMG6-214ENST00000573827 ZNF444Q8N0Y2 327 aaPredicted RBP20.76■□□□□ 0.91
SMG6-214ENST00000573827 TRPV1Q8NER1 839 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 MROH8Q9H579 483 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 CLIP2Q9UDT6 1046 aa20.76■□□□□ 0.91
SMG6-214ENST00000573827 MYH4Q9Y623 1939 aa20.75■□□□□ 0.91
SMG6-214ENST00000573827 FAM47AQ5JRC9 791 aa20.75■□□□□ 0.91
SMG6-214ENST00000573827 ABRAQ8N0Z2 381 aa20.75■□□□□ 0.91
SMG6-214ENST00000573827 ZNF287Q9HBT7 754 aa20.75■□□□□ 0.91
SMG6-214ENST00000573827 IVNS1ABPQ9Y6Y0 642 aa20.75■□□□□ 0.91
SMG6-214ENST00000573827 NOVP48745 357 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 PDE4BQ07343 736 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 NMIQ13287 307 aaPredicted RBP20.74■□□□□ 0.91
SMG6-214ENST00000573827 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 OLFML2BQ68BL8 750 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 RIOX2Q8IUF8 465 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 GMCL1P1Q8NEA9 526 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 IL17RBQ9NRM6 502 aa20.74■□□□□ 0.91
SMG6-214ENST00000573827 TTLL1O95922 423 aa20.73■□□□□ 0.91
SMG6-214ENST00000573827 CYP2C19P33261 490 aa20.73■□□□□ 0.91
SMG6-214ENST00000573827 TFAP4Q01664 338 aa20.73■□□□□ 0.91
SMG6-214ENST00000573827 HABP4Q5JVS0 413 aaKnown RBP20.73■□□□□ 0.91
SMG6-214ENST00000573827 LRRC47Q8N1G4 583 aaKnown RBP20.73■□□□□ 0.91
SMG6-214ENST00000573827 SLF1Q9BQI6 1058 aa20.73■□□□□ 0.91
SMG6-214ENST00000573827 HTATIP2Q9BUP3 242 aa20.73■□□□□ 0.91
SMG6-214ENST00000573827 CWC22Q9HCG8 908 aaKnown RBP20.73■□□□□ 0.91
SMG6-214ENST00000573827 ORC4O43929 436 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 SLC25A27O95847 323 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 FGAP02671 866 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 HSPD1P10809 573 aaKnown RBP20.72■□□□□ 0.91
SMG6-214ENST00000573827 COL6A1P12109 1028 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 CYBAP13498 195 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 STAT3P40763 770 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 PLS1Q14651 629 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 NECAB2Q7Z6G3 386 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 NCAPG2Q86XI2 1143 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 DPF3Q92784 378 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 PRO3102Q9H379 93 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 PFASO15067 1338 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 ZMYM6O95789 1325 aa20.72■□□□□ 0.91
SMG6-214ENST00000573827 FRMPD3Q5JV73 1810 aa20.71■□□□□ 0.91
SMG6-214ENST00000573827 ZNFX1Q9P2E3 1918 aaKnown RBP20.71■□□□□ 0.91
SMG6-214ENST00000573827 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
SMG6-214ENST00000573827 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
SMG6-214ENST00000573827 MFSD14CQ5VZR4 134 aa20.71■□□□□ 0.91
SMG6-214ENST00000573827 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
SMG6-214ENST00000573827 COLQQ9Y215 455 aaPredicted RBP20.71■□□□□ 0.91
SMG6-214ENST00000573827 ATP2A1O14983 1001 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 NMT2O60551 498 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 SLC3A2P08195 630 aaKnown RBP20.7■□□□□ 0.9
SMG6-214ENST00000573827 SDSP20132 328 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 PDE4AP27815 886 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 DPP9Q86TI2 863 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 RIPK3Q9Y572 518 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 CCDC171Q6TFL3 1326 aa20.7■□□□□ 0.9
SMG6-214ENST00000573827 RAD21O60216 631 aa20.69■□□□□ 0.9
SMG6-214ENST00000573827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.69■□□□□ 0.9
SMG6-214ENST00000573827 PRPF38AQ8NAV1 312 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms