RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ABCA9Q8IUA7 1624 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 CEP104O60308 925 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 STK10O94804 968 aaKnown RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 EPHB4P54760 987 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 PPARAQ07869 468 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 RUBCNQ92622 972 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 MAK16Q9BXY0 300 aaKnown RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 FAM114A2Q9NRY5 505 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 LAMC1P11047 1609 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 ABCC12Q96J65 1359 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 EIF3CLB5ME19 914 aaKnown RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 ATP2C2O75185 946 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 TRPC3Q13507 836 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 EIF3CQ99613 913 aaKnown RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 CAPS2Q9BXY5 557 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 LMNB2Q03252 620 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 FAM173BQ6P4H8 233 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 ARMT1Q9H993 441 aa13.69□□□□□ -0.22
PCDHGA9-201ENST00000573521 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 ARHGEF35A5YM69 484 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 LIFRP42702 1097 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 PPP1R13BQ96KQ4 1090 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 PTH1RQ03431 593 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 ORC2Q13416 577 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 SLMAPQ14BN4 828 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 ZSCAN10Q96SZ4 725 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 PALD1Q9ULE6 856 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 SH2D4BQ5SQS7 431 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 PHLDB3Q6NSJ2 640 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 VSIG1Q86XK7 387 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 STK17AQ9UEE5 414 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 A2ML1A8K2U0 1454 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 SCG2P13521 617 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 KRT71Q3SY84 523 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 GLE1Q53GS7 698 aaKnown RBP13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 CFAP157Q5JU67 520 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
PCDHGA9-201ENST00000573521 ZAP70P43403 619 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 SLC8A3P57103 927 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 AOC3Q16853 763 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 NSUN7Q8NE18 718 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 HAUS2Q9NVX0 235 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 A0A087WUV0 522 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 THAP12O43422 761 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 OR52Z1P0C646 297 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 SLFN14P0C7P3 912 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 PHBP35232 272 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 PSMD2Q13200 908 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 ACTR5Q9H9F9 607 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 CTTNBP2NLQ9P2B4 639 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 RGS16O15492 202 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 FMNL1O95466 1100 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 CNGA1P29973 690 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 COPB1P53618 953 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 ARL6IP4Q66PJ3 421 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 RAB3IL1Q8TBN0 382 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 TUBB6Q9BUF5 446 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 H2AFZP0C0S5 128 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 IFNAR1P17181 557 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 CTSWP56202 376 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 PNOCQ13519 176 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 HHATQ5VTY9 493 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 H2AFVQ71UI9 128 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 TRIM11Q96F44 468 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 KLHL14Q9P2G3 628 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 LARSQ9P2J5 1176 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
PCDHGA9-201ENST00000573521 EFCAB6Q5THR3 1501 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 I3L4J1 428 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 PDE6AP16499 860 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 EIF3BP55884 814 aaKnown RBP13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 NAA25Q14CX7 972 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 NEK8Q86SG6 692 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 EFCC1Q9HA90 598 aa13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 RPN1P04843 607 aaKnown RBP13.66□□□□□ -0.22
PCDHGA9-201ENST00000573521 MAP2K2P36507 400 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms