RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 RBPJLQ9UBG7 517 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 ADAMTS5Q9UNA0 930 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 ERICH2A1L162 156 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 IFIT3O14879 490 aaKnown RBP20.26■□□□□ 0.83
LITAF-212ENST00000573332 FLOT1O75955 427 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
LITAF-212ENST00000573332 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 MCCP23508 829 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 SLC1A4P43007 532 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 IFIT1BQ5T764 474 aaKnown RBP20.26■□□□□ 0.83
LITAF-212ENST00000573332 ERO1AQ96HE7 468 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 TMEM87BQ96K49 555 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 NUP88Q99567 741 aaPredicted RBP20.26■□□□□ 0.83
LITAF-212ENST00000573332 KAT14Q9H8E8 782 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 FEM1BQ9UK73 627 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
LITAF-212ENST00000573332 PRC1O43663 620 aa20.25■□□□□ 0.83
LITAF-212ENST00000573332 LACTBP83111 547 aaPredicted RBP20.25■□□□□ 0.83
LITAF-212ENST00000573332 ADCK5Q3MIX3 580 aa20.25■□□□□ 0.83
LITAF-212ENST00000573332 ANKRD13CQ8N6S4 541 aa20.25■□□□□ 0.83
LITAF-212ENST00000573332 MB21D1Q8N884 522 aa20.25■□□□□ 0.83
LITAF-212ENST00000573332 PNMA1Q8ND90 353 aa20.25■□□□□ 0.83
LITAF-212ENST00000573332 PPP1R9AQ9ULJ8 1098 aa20.25■□□□□ 0.83
LITAF-212ENST00000573332 PDHBP11177 359 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 EXOSC10Q01780 885 aaKnown RBP20.24■□□□□ 0.83
LITAF-212ENST00000573332 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
LITAF-212ENST00000573332 WTAPQ15007 396 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
LITAF-212ENST00000573332 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 FAM160B2Q86V87 743 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 TMTC2Q8N394 836 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
LITAF-212ENST00000573332 SLF1Q9BQI6 1058 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 TXNRD2Q9NNW7 524 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 FBXO28Q9NVF7 368 aa20.24■□□□□ 0.83
LITAF-212ENST00000573332 MYH4Q9Y623 1939 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 CNMDO75829 334 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 LIFRP42702 1097 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 ARHGEF6Q15052 776 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 TMEM67Q5HYA8 995 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 CHURC1Q8WUH1 139 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 ATG4CQ96DT6 458 aa20.23■□□□□ 0.83
LITAF-212ENST00000573332 TMEM232C9JQI7 657 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 SEC24BO95487 1268 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 FDX1P10109 184 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 PSMA5P28066 241 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 STAT2P52630 851 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 ERVK-9P63128 1117 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 ERVK-24P63145 666 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 ZNF543Q08ER8 600 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 KIF22Q14807 665 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 GPATCH4Q5T3I0 446 aaKnown RBP20.22■□□□□ 0.83
LITAF-212ENST00000573332 BTNL9Q6UXG8 535 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 CD99L2Q8TCZ2 262 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 LY9Q9HBG7 655 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 BTBD7Q9P203 1132 aa20.22■□□□□ 0.83
LITAF-212ENST00000573332 VWA5AO00534 786 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 SH2B2O14492 632 aaPredicted RBP20.21■□□□□ 0.83
LITAF-212ENST00000573332 GNRH1P01148 92 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 ANAPC15P60006 121 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 Q3C1V9 767 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 KCTD1Q719H9 257 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 RASGRP2Q7LDG7 609 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 JAKMIP1Q96N16 626 aaKnown RBP20.21■□□□□ 0.83
LITAF-212ENST00000573332 PAGR1Q9BTK6 254 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
LITAF-212ENST00000573332 RLFQ13129 1914 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 CCNA1P78396 465 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 CAP1Q01518 475 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 CCDC96Q2M329 555 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 CTU1Q7Z7A3 348 aaKnown RBP20.2■□□□□ 0.82
LITAF-212ENST00000573332 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 REPS2Q8NFH8 660 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 SENP2Q9HC62 589 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
LITAF-212ENST00000573332 ATP2A1O14983 1001 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 CTGFP29279 349 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 PSMC4P43686 418 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 FCGRTP55899 365 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 TROAPQ12815 778 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 ASPRV1Q53RT3 343 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 BLOC1S2Q6QNY1 142 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 SGMS1Q86VZ5 419 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 MAP3K14Q99558 947 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 EFCC1Q9HA90 598 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 SLC38A10Q9HBR0 1119 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 ZSWIM6Q9HCJ5 1215 aa20.19■□□□□ 0.82
LITAF-212ENST00000573332 PEX10O60683 326 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 ZBED4O75132 1171 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 MAPK4P31152 587 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 TMEM132BQ14DG7 1078 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 TTBK2Q6IQ55 1244 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 OTOP1Q7RTM1 612 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 CATIPQ7Z7H3 387 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 SHCBP1Q8NEM2 672 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 KIFC2Q96AC6 838 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms